Non-Coding RNA Search

Mixc-0041,n07

Sequence:


               
               CGACCCTGATTTTACTCCTGGGGAAAGTGAGGCACAGAGATATCAATGACTTGCCCCGGG
TCACACCCCCAGTAAGTGGTGGAGTCAGGATTTGAATCTAGGACATCTAGTTCCCGAGTC
CTTGCACTTAAAGTCATGTTCTCTGACTTTGGGCAAAAGTGCTGTTGCACTTCAGAGACC
GTCCTTGCCCTGAGCAAGTGCCTTTCTCTAGCTCTTCCCCAGGTGGAGGGAAGGCTAGCA
GTGACCTTGGCTGGCTCTGGAATCACACCCGAGTTTGATCCCTGCCTCTACTACTTACTG
TAGCTTTGAGAAGTTATTTGCTGACTTCAGTGAGCCTCGATTTTCCCCACGTGTCAAATA
GGAATAATAATAGTATGAGATGggagttcccgggtggcctagtgggttgaagatctggag
ttgtcattgctatagctcaggtttgatcccctggcctgggaactcccgcatgccAAGGGC
ATGGCCGGAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGACCCTGATTTTACTCCTGGGGAAAGTGAGGCACAGAGATATCAATGACTTGCCCCGGG
TCACACCCCCAGTAAGTGGTGGAGTCAGGATTTGAATCTAGGACATCTAGTTCCCGAGTC
CTTGCACTTAAAGTCATGTTCTCTGACTTTGGGCAAAAGTGCTGTTGCACTTCAGAGACC
GTCCTTGCCCTGAGCAAGTGCCTTTCTCTAGCTCTTCCCCAGGTGGAGGGAAGGCTAGCA
GTGACCTTGGCTGGCTCTGGAATCACACCCGAGTTTGATCCCTGCCTCTACTACTTACTG
TAGCTTTGAGAAGTTATTTGCTGACTTCAGTGAGCCTCGATTTTCCCCACGTGTCAAATA
GGAATAATAATAGTATGAGATGggagttcccgggtggcctagtgggttgaagatctggag
ttgtcattgctatagctcaggtttgatcccctggcctgggaactcccgcatgccAAGGGC
ATGGCCGGAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               120-269, + strand, RNAz p=0.98902

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               120-269, + strand, RNAz p=0.98902

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-382, gnl|bosTau2|chr20 (23078246-23078627)
               

               
               2-382, gnl|Hg17|chr20 (36876171-36876566)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-382, gnl|bosTau2|chr20 (23078246-23078627)
               

               
               2-382, gnl|Hg17|chr20 (36876171-36876566)

	2-382, gnl\|bosTau2\|chr20 (23078246-23078627)
	2-382, gnl\|Hg17\|chr20 (36876171-36876566)