Mixc-0042,f24
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGAAGTTTAACTGTCCGAGAAGAGAGCCTGAAATATTTTGGGTGCACTCACAAGGGATGC TAATGCAGAAGAAAGAGTGGCTGAAAAGATCCCTGCAGAAATTAATGGTGCAAAGCCTGA CACCATGCTCATCACCTGGAAGTTGTTCATTAGGCCATAGGAACAAGGATTGCTTTGACA GGATGAAAAGTCAAAGTTTAATTTGCAGGCTGCAGAAGTACAGTTTGTTAGCTCTGTTAT AATAGTGTCATTAACGTTCCCAGTGGCATCCCGAACAACACAAGAACCTACAGATACTGC AATTCCTATGTAAACCAGCGTAGTGATTAAAATGGCTAGGAGTGTTCCTTTCGGTATAGC TGACTGAGGATCTGCAAGATCACCTGAGATATTTGCTCCGGCTAAAATACCAGTTGCAGC AGGGAAAAAGATGGCAAATACGGAAAAGAAGGTCTCTTCCTCTCGAAAATCTGGCCCAAA GTTCTCATTAAATATTTCAGATTTATAACCAAAGAAACCTTTGGGCTTCTTGCTCTCCAA GGGGATAAATGTTCCTATGACGAAATCAGCAATAGCAAGTAGTAGAATCACCAAAAGAAC AATCTGAGCTTTTGCCTCCCACTCCATTCCAGCAACTGAGATACCTAANAGGATCACCAC CGTAATGGCTCCAATAATTCGGATATCATTGATTTCATCTATCATCAGTATGGAATGTTC CTTAAGCAACTCCCACACAGTTTCTGCAAATCCNACCACGTACATAGCAACTGCAACAGC ATTGGCAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGAAGTTTAACTGTCCGAGAAGAGAGCCTGAAATATTTTGGGTGCACTCACAAGGGATGC TAATGCAGAAGAAAGAGTGGCTGAAAAGATCCCTGCAGAAATTAATGGTGCAAAGCCTGA CACCATGCTCATCACCTGGAAGTTGTTCATTAGGCCATAGGAACAAGGATTGCTTTGACA GGATGAAAAGTCAAAGTTTAATTTGCAGGCTGCAGAAGTACAGTTTGTTAGCTCTGTTAT AATAGTGTCATTAACGTTCCCAGTGGCATCCCGAACAACACAAGAACCTACAGATACTGC AATTCCTATGTAAACCAGCGTAGTGATTAAAATGGCTAGGAGTGTTCCTTTCGGTATAGC TGACTGAGGATCTGCAAGATCACCTGAGATATTTGCTCCGGCTAAAATACCAGTTGCAGC AGGGAAAAAGATGGCAAATACGGAAAAGAAGGTCTCTTCCTCTCGAAAATCTGGCCCAAA GTTCTCATTAAATATTTCAGATTTATAACCAAAGAAACCTTTGGGCTTCTTGCTCTCCAA GGGGATAAATGTTCCTATGACGAAATCAGCAATAGCAAGTAGTAGAATCACCAAAAGAAC AATCTGAGCTTTTGCCTCCCACTCCATTCCAGCAACTGAGATACCTAANAGGATCACCAC CGTAATGGCTCCAATAATTCGGATATCATTGATTTCATCTATCATCAGTATGGAATGTTC CTTAAGCAACTCCCACACAGTTTCTGCAAATCCNACCACGTACATAGCAACTGCAACAGC ATTGGCAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 382-499, - strand, RNAz p=0.581876 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 382-499, - strand, RNAz p=0.581876 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 132-289, gnl|bosTau2|chr6 (42034085-42034242) | |
| 132-289, gnl|Hg17|chr5 (127505576-127505419) | |
| 132-289, gnl|Mm7|chr18 (58285381-58285224) | |
| 372-499, gnl|bosTau2|chr6 (42036305-42036432) | |
| 372-499, gnl|Hg17|chr5 (127502316-127502189) | |
| 372-499, gnl|Mm7|chr18 (58283525-58283398) | |
| 609-722, gnl|bosTau2|chr6 (42039995-42040108) | |
| 609-722, gnl|canFam2|chr11 (20199538-20199634) | |
| 609-722, gnl|danRer3|chrNA (219844892-219844796) | |
| 609-722, gnl|dasNov1|scaffold_109816 (5971-6067) | |
| 609-722, gnl|echTel1|scaffold_296449 (36089-36168) | |
| 609-722, gnl|fr1|chrUn (65142070-65141974) | |
| 609-722, gnl|galGal2|chrW (3976107-3976011) | |
| 609-722, gnl|hg17|chr5 (127497755-127497851) | |
| 609-722, gnl|Hg17|chr5 (127497867-127497754) | |
| 609-722, gnl|loxAfr1|scaffold_16324 (6860-6764) | |
| 609-722, gnl|mm7|chr18 (58279294-58279390) | |
| 609-722, gnl|Mm7|chr18 (58279406-58279293) | |
| 609-722, gnl|monDom2|scaffold_55 (932481-932385) | |
| 609-722, gnl|oryCun1|scaffold_207077 (41028-40932) | |
| 609-722, gnl|panTro1|chr4 (133846858-133846954) | |
| 609-722, gnl|rheMac2|chr6 (124534235-124534331) | |
| 609-722, gnl|rn3|chr18 (53756625-53756721) | |
| 609-722, gnl|tetNig1|chr5 (10058049-10058145) | |
| 609-722, gnl|xenTro1|scaffold_2 (2974527-2974431) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 132-289, gnl|bosTau2|chr6 (42034085-42034242) | |
| 132-289, gnl|Hg17|chr5 (127505576-127505419) | |
| 132-289, gnl|Mm7|chr18 (58285381-58285224) | |
| 372-499, gnl|bosTau2|chr6 (42036305-42036432) | |
| 372-499, gnl|Hg17|chr5 (127502316-127502189) | |
| 372-499, gnl|Mm7|chr18 (58283525-58283398) | |
| 609-722, gnl|bosTau2|chr6 (42039995-42040108) | |
| 609-722, gnl|canFam2|chr11 (20199538-20199634) | |
| 609-722, gnl|danRer3|chrNA (219844892-219844796) | |
| 609-722, gnl|dasNov1|scaffold_109816 (5971-6067) | |
| 609-722, gnl|echTel1|scaffold_296449 (36089-36168) | |
| 609-722, gnl|fr1|chrUn (65142070-65141974) | |
| 609-722, gnl|galGal2|chrW (3976107-3976011) | |
| 609-722, gnl|hg17|chr5 (127497755-127497851) | |
| 609-722, gnl|Hg17|chr5 (127497867-127497754) | |
| 609-722, gnl|loxAfr1|scaffold_16324 (6860-6764) | |
| 609-722, gnl|mm7|chr18 (58279294-58279390) | |
| 609-722, gnl|Mm7|chr18 (58279406-58279293) | |
| 609-722, gnl|monDom2|scaffold_55 (932481-932385) | |
| 609-722, gnl|oryCun1|scaffold_207077 (41028-40932) | |
| 609-722, gnl|panTro1|chr4 (133846858-133846954) | |
| 609-722, gnl|rheMac2|chr6 (124534235-124534331) | |
| 609-722, gnl|rn3|chr18 (53756625-53756721) | |
| 609-722, gnl|tetNig1|chr5 (10058049-10058145) | |
| 609-722, gnl|xenTro1|scaffold_2 (2974527-2974431) |