Non-Coding RNA Search

Mixc-0043,i08

Sequence:


               
               GCGACGAGAGGCGCCGGGCGCTCCATGGCCGCGCCGTAACGGGGACCCAGCCGCCTCCCC
GCCCAGCCCAACCCAGCCCTTCTGCCCGCCCAGGATGGAGGCGCCCGCCAGCGCGCAGAC
CCCGCACCCGCACGAGCCCATCAGCTTCGGCATCGACCAGATCCTCAACAGCCCGGACCA
GGACAGCGCACCAGCCCCGCGGGGCCCCGACGGCGCCAGCTACCTGGGAGGGCCCCCCGG
GGGCCGTCCGGGCGCCACATACCCTTCTCTGCCCGCCTCCTTTGCCGGCCTCGGCGCGCC
CTTCGAGGACGCGGGATCTTACAGTGTCAACCTGAGCCTGGCGCCCGCCGGCGTGATCCG
GGTGCCGGCGCACAGGCCGCTGCCCGGGGCCGTGCCGCCGCCTCTGCCTAGCGCGCTGCC
CGCCATGCCCTCCGTGCCCGCGGTCTCCAGTCTGGGTGGCCTCAATTTCCCCTGGATGGA
GAGTAGCCGCCGCTTCGTGAAAGACCGTTTCACAGCGGCGGCGGCGCTCACGCCCTTCAC
GGTGACCCGGCGCATCGGCCACCCTTACCAGAACAGGACGCCGCCCAAGCGTAAGAAGCC
GCGCACGTCCTTTTCTCGGGTGCAGATCTGCGAGCTGGAAAAGCGTTTCCACCGCCAGAA
GTACCTAGCCTCGGCCGAGAGGGCGGCGCTCGCGAAGTCCCTCAAAATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGACGAGAGGCGCCGGGCGCTCCATGGCCGCGCCGTAACGGGGACCCAGCCGCCTCCCC
GCCCAGCCCAACCCAGCCCTTCTGCCCGCCCAGGATGGAGGCGCCCGCCAGCGCGCAGAC
CCCGCACCCGCACGAGCCCATCAGCTTCGGCATCGACCAGATCCTCAACAGCCCGGACCA
GGACAGCGCACCAGCCCCGCGGGGCCCCGACGGCGCCAGCTACCTGGGAGGGCCCCCCGG
GGGCCGTCCGGGCGCCACATACCCTTCTCTGCCCGCCTCCTTTGCCGGCCTCGGCGCGCC
CTTCGAGGACGCGGGATCTTACAGTGTCAACCTGAGCCTGGCGCCCGCCGGCGTGATCCG
GGTGCCGGCGCACAGGCCGCTGCCCGGGGCCGTGCCGCCGCCTCTGCCTAGCGCGCTGCC
CGCCATGCCCTCCGTGCCCGCGGTCTCCAGTCTGGGTGGCCTCAATTTCCCCTGGATGGA
GAGTAGCCGCCGCTTCGTGAAAGACCGTTTCACAGCGGCGGCGGCGCTCACGCCCTTCAC
GGTGACCCGGCGCATCGGCCACCCTTACCAGAACAGGACGCCGCCCAAGCGTAAGAAGCC
GCGCACGTCCTTTTCTCGGGTGCAGATCTGCGAGCTGGAAAAGCGTTTCCACCGCCAGAA
GTACCTAGCCTCGGCCGAGAGGGCGGCGCTCGCGAAGTCCCTCAAAATG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|57085631|ref|XP_546241.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|57085631|ref|XP_546241.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               1-515, gnl|bosTau2|chr20 (2566952-2566438)
               

               
               1-515, gnl|Hg17|chr5 (170668881-170669395)
               

               
               1-515, gnl|Mm7|chr11 (33155563-33155049)
               


               
               521-702, gnl|bosTau2|chr11 (7773324-7773143)
               

               
               521-702, gnl|Hg17|chr2 (74654414-74654595)
               

               
               521-702, gnl|Mm7|chr6 (83094726-83094545)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-515, gnl|bosTau2|chr20 (2566952-2566438)
               

               
               1-515, gnl|Hg17|chr5 (170668881-170669395)
               

               
               1-515, gnl|Mm7|chr11 (33155563-33155049)
               


               
               521-702, gnl|bosTau2|chr11 (7773324-7773143)
               

               
               521-702, gnl|Hg17|chr2 (74654414-74654595)
               

               
               521-702, gnl|Mm7|chr6 (83094726-83094545)

	1-515, gnl\|bosTau2\|chr20 (2566952-2566438)
	1-515, gnl\|Hg17\|chr5 (170668881-170669395)
	1-515, gnl\|Mm7\|chr11 (33155563-33155049)

	521-702, gnl\|bosTau2\|chr11 (7773324-7773143)
	521-702, gnl\|Hg17\|chr2 (74654414-74654595)
	521-702, gnl\|Mm7\|chr6 (83094726-83094545)