Mixc-0043,n09
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTCTGTGTCCTGTTTCTTTTCCTGGAACATGGCACTGAACCTCTCTATTTCAGCAGACAG ATTGCCATTCATAATTTTGCTGTAGTCCACCTGTCCTCTCATGGCTCGGATCTTCTTCAG CTTATTTTCCTGGGCTTCCACGCGTTCTTTCAATTTCTGAAGCTTTTCGTTTTCAGAAAC AGACTGTTGCTGACGGCGCTCCTGCTGCTTTAGAAAATGTAAACGCTGCTCCTTGGCAAC CAACATTTGCTGCTGGTTTTCAATTTGCTGTTGTTGCCTAGCTGCCATATCTTGGAGCTC TGAGAGGGTAAGTTCAACACGTGGATTCCCAACCCCATTTTCAGCCCGTTTTTCTCCAGG TACATTTATTACATTTCTCTGAGTTCTTTGCTCTTGGGTCTGACGGCCACCTTGTTCGCT GCTCTCAGTTGGGGAATCCTCATGTCGAAGGAAAAATTTCACTTCTTCCCTTCGTGGCCC CCACTTCTGAAGATGTTCGTACATCATATAATCGAAGGGTATGGGACGCTCATTTCCCCG CCACACTTCAGCTAAATGGCAACTGCCTTCTCCAGGCTCCTTGCAAAACTCTACAACATC TCGACATGTTGTTTCTGGTGTTACAGGAACTTCCGTTAAAATCTGTTCATTGTTGCTCAA GAACACAGTTAATATCATCGGCATCATCGCGGCGCGGGTACGTGGCGCCCTCAGCCGCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTCTGTGTCCTGTTTCTTTTCCTGGAACATGGCACTGAACCTCTCTATTTCAGCAGACAG ATTGCCATTCATAATTTTGCTGTAGTCCACCTGTCCTCTCATGGCTCGGATCTTCTTCAG CTTATTTTCCTGGGCTTCCACGCGTTCTTTCAATTTCTGAAGCTTTTCGTTTTCAGAAAC AGACTGTTGCTGACGGCGCTCCTGCTGCTTTAGAAAATGTAAACGCTGCTCCTTGGCAAC CAACATTTGCTGCTGGTTTTCAATTTGCTGTTGTTGCCTAGCTGCCATATCTTGGAGCTC TGAGAGGGTAAGTTCAACACGTGGATTCCCAACCCCATTTTCAGCCCGTTTTTCTCCAGG TACATTTATTACATTTCTCTGAGTTCTTTGCTCTTGGGTCTGACGGCCACCTTGTTCGCT GCTCTCAGTTGGGGAATCCTCATGTCGAAGGAAAAATTTCACTTCTTCCCTTCGTGGCCC CCACTTCTGAAGATGTTCGTACATCATATAATCGAAGGGTATGGGACGCTCATTTCCCCG CCACACTTCAGCTAAATGGCAACTGCCTTCTCCAGGCTCCTTGCAAAACTCTACAACATC TCGACATGTTGTTTCTGGTGTTACAGGAACTTCCGTTAAAATCTGTTCATTGTTGCTCAA GAACACAGTTAATATCATCGGCATCATCGCGGCGCGGGTACGTGGCGCCCTCAGCCGCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 114-233, - strand, RNAz p=0.880692 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 114-233, - strand, RNAz p=0.880692 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 59-233, gnl|bosTau2|chr21 (48594468-48594642) | |
| 59-233, gnl|Hg17|chr14 (103290162-103290336) | |
| 59-233, gnl|Mm7|chr12 (109369769-109369943) | |
| 409-531, gnl|bosTau2|chr21 (48612369-48612491) | |
| 409-531, gnl|canFam2|chr8 (74552924-74553047) | |
| 409-531, gnl|danRer3|chr20 (23056249-23056355) | |
| 409-531, gnl|dasNov1|scaffold_22997 (17953-18079) | |
| 409-531, gnl|echTel1|scaffold_183659 (6035-5898) | |
| 409-531, gnl|fr1|chrUn (142049714-142049589) | |
| 409-531, gnl|galGal2|chr5 (47319593-47319704) | |
| 409-531, gnl|hg17|chr14 (103320865-103320990) | |
| 409-531, gnl|Hg17|chr14 (103320883-103321005) | |
| 409-531, gnl|loxAfr1|scaffold_134734 (3883-3757) | |
| 409-531, gnl|mm7|chr12 (109391336-109391465) | |
| 409-531, gnl|Mm7|chr12 (109391358-109391480) | |
| 409-531, gnl|monDom2|scaffold_6 (88553202-88553316) | |
| 409-531, gnl|oryCun1|scaffold_212745 (33146-33271) | |
| 409-531, gnl|panTro1|chr15 (103947265-103947390) | |
| 409-531, gnl|rheMac2|chr7 (167146939-167147064) | |
| 409-531, gnl|rn3|chr6 (136663216-136663348) | |
| 409-531, gnl|tetNig1|chr14 (5171316-5171209) | |
| 536-679, gnl|bosTau2|chr16 (16493913-16493770) | |
| 536-679, gnl|Hg17|chr1 (220315662-220315805) | |
| 536-679, gnl|Mm7|chr1 (182413831-182413688) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 59-233, gnl|bosTau2|chr21 (48594468-48594642) | |
| 59-233, gnl|Hg17|chr14 (103290162-103290336) | |
| 59-233, gnl|Mm7|chr12 (109369769-109369943) | |
| 409-531, gnl|bosTau2|chr21 (48612369-48612491) | |
| 409-531, gnl|canFam2|chr8 (74552924-74553047) | |
| 409-531, gnl|danRer3|chr20 (23056249-23056355) | |
| 409-531, gnl|dasNov1|scaffold_22997 (17953-18079) | |
| 409-531, gnl|echTel1|scaffold_183659 (6035-5898) | |
| 409-531, gnl|fr1|chrUn (142049714-142049589) | |
| 409-531, gnl|galGal2|chr5 (47319593-47319704) | |
| 409-531, gnl|hg17|chr14 (103320865-103320990) | |
| 409-531, gnl|Hg17|chr14 (103320883-103321005) | |
| 409-531, gnl|loxAfr1|scaffold_134734 (3883-3757) | |
| 409-531, gnl|mm7|chr12 (109391336-109391465) | |
| 409-531, gnl|Mm7|chr12 (109391358-109391480) | |
| 409-531, gnl|monDom2|scaffold_6 (88553202-88553316) | |
| 409-531, gnl|oryCun1|scaffold_212745 (33146-33271) | |
| 409-531, gnl|panTro1|chr15 (103947265-103947390) | |
| 409-531, gnl|rheMac2|chr7 (167146939-167147064) | |
| 409-531, gnl|rn3|chr6 (136663216-136663348) | |
| 409-531, gnl|tetNig1|chr14 (5171316-5171209) | |
| 536-679, gnl|bosTau2|chr16 (16493913-16493770) | |
| 536-679, gnl|Hg17|chr1 (220315662-220315805) | |
| 536-679, gnl|Mm7|chr1 (182413831-182413688) |