Non-Coding RNA Search

Mixg-0010a05

Sequence:


               
               AAAAAAAAAATGAAAGTGAGCCCTGACCCACTCTGTCTCCCAGGGCCTGGCCCCCTAGGC
TTCGAGTCCTGCCCCAAGAGCACATTTAGTTTATACAGATTCTCCCTTTCAGCTGCTCAA
TGCTAGATTTCTCATTTGACGGCTCTGAGGAGTTCGATATTAACGCTTTTGAGGACATCA
TTGCTTTCTATGAAAGCAAGAAGTAAGTAGAAGCAAGGGCCTTCAAACCCAAGACCAGGG
AGGCACGCCACAAGGAGCTGTCATCCCATGATGCTCAGCGCAGCGTCCAGAGCCAGAAGA
GAGGGGGTTGGCAAGCTGGGGCGGGGGGGGGCGCACTCTTGCCAGATTTGGCTGGGTCAC
AGGGGTGGGGGCCAAAGCCATGGGCCTCAGCGTTGTCCCGCACTCCGGCTGCTGCACTGA
CCACTCAGGGTATGGAGGTGAAATGTGACCCCCTGTGTCATCTTTGCCCTGTGCCTCCCT
GGAGGGTGAGCGAGCAGAGGTAAGTAGGGCCACCCGGGCCCAGGGCATGGTGCATGGAAC
ACGGAAAGGGGGCTGCCGCTCGGGCTCTTCCCAGGCCAACTGCCCGGAGCTTAAACATGT
ATTTAAAAATAACTGGAATGAGGAATTTTTTAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAAAAAAATGAAAGTGAGCCCTGACCCACTCTGTCTCCCAGGGCCTGGCCCCCTAGGC
TTCGAGTCCTGCCCCAAGAGCACATTTAGTTTATACAGATTCTCCCTTTCAGCTGCTCAA
TGCTAGATTTCTCATTTGACGGCTCTGAGGAGTTCGATATTAACGCTTTTGAGGACATCA
TTGCTTTCTATGAAAGCAAGAAGTAAGTAGAAGCAAGGGCCTTCAAACCCAAGACCAGGG
AGGCACGCCACAAGGAGCTGTCATCCCATGATGCTCAGCGCAGCGTCCAGAGCCAGAAGA
GAGGGGGTTGGCAAGCTGGGGCGGGGGGGGGCGCACTCTTGCCAGATTTGGCTGGGTCAC
AGGGGTGGGGGCCAAAGCCATGGGCCTCAGCGTTGTCCCGCACTCCGGCTGCTGCACTGA
CCACTCAGGGTATGGAGGTGAAATGTGACCCCCTGTGTCATCTTTGCCCTGTGCCTCCCT
GGAGGGTGAGCGAGCAGAGGTAAGTAGGGCCACCCGGGCCCAGGGCATGGTGCATGGAAC
ACGGAAAGGGGGCTGCCGCTCGGGCTCTTCCCAGGCCAACTGCCCGGAGCTTAAACATGT
ATTTAAAAATAACTGGAATGAGGAATTTTTTAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|6002745|gb|AAF00120.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|6002745|gb|AAF00120.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               437-556, + strand, RNAz p=0.970104

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               437-556, + strand, RNAz p=0.970104

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               15-630, gnl|bosTau2|chr7 (2882300-2881696)
               

               
               15-630, gnl|Hg17|chr19 (17149492-17150142)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-630, gnl|bosTau2|chr7 (2882300-2881696)
               

               
               15-630, gnl|Hg17|chr19 (17149492-17150142)

	15-630, gnl\|bosTau2\|chr7 (2882300-2881696)
	15-630, gnl\|Hg17\|chr19 (17149492-17150142)