Mixg-0011e01
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCAGCCTGGACAATGGGGAGGAAAAAAATTCAGATCTCCCGCATTCTGGACCAAAGGAA TCGGCAGGTAACATTTACCAAGCGGAAGTTCGGACTGATGAAGAAGGCCTATGAGCTGAG TGTGCTCTGCGACTGTGAGATTGCCCTCATCATCTTCAACAGCGCCAACCGCCTCTTCCA GTATGCCAGCACAGACATGGACCGCGTGCTCCTGAAGTACACGGAGTACAGTGAGCCCCA TGAGAGCCGCACCAACACCGACATCCTCGAGACACTGAAGCGGAGGGGGGTGGGCCTTGA TGGACCAGAGCTGGAGCCAGATGAGGGGCTTGAGGGGCCAGGAGAGAAGCTACGGAGACT GGCAGGTGATGGAGGTGACCCAGCCTTGCCCCGACCCCGGCTCTACCCAGCAGCCCCTAC TATGCCCAGCCCGGACATGGTATATGGGGCCCTGCCTCCACCAGGCTGCGACCCCAGTGG GCTTGGGGAGGCCCTGCCTGCCCAGAGCCGTCCATCCCCCTTCCGGCCAGCAGCCCCCAA AGCTGGGCCCCCAGGCCTGGCACACCCTCTCTTCTCACCGAGCCACCTCGCCAGCAAGAC ACCAGCCCCCCTGTACCTGGCAACGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCAGCCTGGACAATGGGGAGGAAAAAAATTCAGATCTCCCGCATTCTGGACCAAAGGAA TCGGCAGGTAACATTTACCAAGCGGAAGTTCGGACTGATGAAGAAGGCCTATGAGCTGAG TGTGCTCTGCGACTGTGAGATTGCCCTCATCATCTTCAACAGCGCCAACCGCCTCTTCCA GTATGCCAGCACAGACATGGACCGCGTGCTCCTGAAGTACACGGAGTACAGTGAGCCCCA TGAGAGCCGCACCAACACCGACATCCTCGAGACACTGAAGCGGAGGGGGGTGGGCCTTGA TGGACCAGAGCTGGAGCCAGATGAGGGGCTTGAGGGGCCAGGAGAGAAGCTACGGAGACT GGCAGGTGATGGAGGTGACCCAGCCTTGCCCCGACCCCGGCTCTACCCAGCAGCCCCTAC TATGCCCAGCCCGGACATGGTATATGGGGCCCTGCCTCCACCAGGCTGCGACCCCAGTGG GCTTGGGGAGGCCCTGCCTGCCCAGAGCCGTCCATCCCCCTTCCGGCCAGCAGCCCCCAA AGCTGGGCCCCCAGGCCTGGCACACCCTCTCTTCTCACCGAGCCACCTCGCCAGCAAGAC ACCAGCCCCCCTGTACCTGGCAACGGA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 441-555, - strand, RNAz p=0.54313 | |
| 449-555, - strand, RNAz p=0.509057 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 441-555, - strand, RNAz p=0.54313 | |
| 449-555, - strand, RNAz p=0.509057 |
| Aligned organism(s): 47 entry(ies) | More info |
| Aligned organism(s): 47 entry(ies) | Help | Less info |
| 66-271, gnl|bosTau2|chr21 (4639652-4639857) | |
| 66-271, gnl|canFam2|chr3 (43937089-43937282) | |
| 66-271, gnl|canFam2|chr3 (43937318-43937076) | |
| 66-271, gnl|danRer3|chr18 (28030091-28030289) | |
| 66-271, gnl|danRer3|chr18 (28030315-28030080) | |
| 66-271, gnl|dasNov1|scaffold_47448 (9811-10006) | |
| 66-271, gnl|dasNov1|scaffold_47448 (10037-9798) | |
| 66-271, gnl|echTel1|scaffold_310139 (136234-136430) | |
| 66-271, gnl|echTel1|scaffold_310139 (136463-136221) | |
| 66-271, gnl|fr1|chrUn (31261918-31261720) | |
| 66-271, gnl|fr1|chrUn (31261708-31261929) | |
| 66-271, gnl|galGal2|chr10 (17904271-17904469) | |
| 66-271, gnl|galGal2|chr10 (17904496-17904260) | |
| 66-271, gnl|hg17|chr1 (176148996-176149181) | |
| 66-271, gnl|hg17|chr15 (98003261-98003497) | |
| 66-271, gnl|Hg17|chr15 (98003287-98003492) | |
| 66-271, gnl|loxAfr1|scaffold_7744 (39822-39629) | |
| 66-271, gnl|loxAfr1|scaffold_7744 (39597-39835) | |
| 66-271, gnl|mm7|chr3 (88270320-88270122) | |
| 66-271, gnl|mm7|chr7 (63157023-63156788) | |
| 66-271, gnl|Mm7|chr7 (63156996-63156791) | |
| 66-271, gnl|monDom2|scaffold_12 (61128168-61128366) | |
| 66-271, gnl|monDom2|scaffold_12 (61128402-61128157) | |
| 66-271, gnl|oryCun1|scaffold_199193 (3495-3693) | |
| 66-271, gnl|oryCun1|scaffold_199193 (3728-3484) | |
| 66-271, gnl|panTro1|chr1 (158543769-158543952) | |
| 66-271, gnl|panTro1|chr16 (99073910-99074147) | |
| 66-271, gnl|rheMac2|chr1 (191278783-191278598) | |
| 66-271, gnl|rheMac2|chr7 (79678810-79679046) | |
| 66-271, gnl|rn3|chr2 (12124371-12124176) | |
| 66-271, gnl|rn3|chr2 (12124149-12124382) | |
| 66-271, gnl|tetNig1|chr13 (2967588-2967786) | |
| 66-271, gnl|tetNig1|chr13 (2967788-2967577) | |
| 66-271, gnl|xenTro1|scaffold_208 (1539795-1539993) | |
| 66-271, gnl|xenTro1|scaffold_208 (1540005-1539784) | |
| 407-555, gnl|bosTau2|chr7 (2594511-2594363) | |
| 407-555, gnl|canFam2|chr20 (47019077-47018863) | |
| 407-555, gnl|echTel1|scaffold_301999 (38229-38440) | |
| 407-555, gnl|hg17|chr19 (19118828-19119036) | |
| 407-555, gnl|Hg17|chr19 (19118992-19118844) | |
| 407-555, gnl|loxAfr1|scaffold_114311 (1965-1747) | |
| 407-555, gnl|mm7|chr8 (68621390-68621217) | |
| 407-555, gnl|Mm7|chr8 (68621250-68621380) | |
| 407-555, gnl|monDom2|scaffold_75 (2022222-2022464) | |
| 407-555, gnl|panTro1|chr20 (20193171-20193379) | |
| 407-555, gnl|rheMac2|chr19 (18787614-18787822) | |
| 407-555, gnl|rn3|chr16 (19737248-19737427) |
| Aligned organism(s): 47 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 66-271, gnl|bosTau2|chr21 (4639652-4639857) | |
| 66-271, gnl|canFam2|chr3 (43937089-43937282) | |
| 66-271, gnl|canFam2|chr3 (43937318-43937076) | |
| 66-271, gnl|danRer3|chr18 (28030091-28030289) | |
| 66-271, gnl|danRer3|chr18 (28030315-28030080) | |
| 66-271, gnl|dasNov1|scaffold_47448 (9811-10006) | |
| 66-271, gnl|dasNov1|scaffold_47448 (10037-9798) | |
| 66-271, gnl|echTel1|scaffold_310139 (136234-136430) | |
| 66-271, gnl|echTel1|scaffold_310139 (136463-136221) | |
| 66-271, gnl|fr1|chrUn (31261918-31261720) | |
| 66-271, gnl|fr1|chrUn (31261708-31261929) | |
| 66-271, gnl|galGal2|chr10 (17904271-17904469) | |
| 66-271, gnl|galGal2|chr10 (17904496-17904260) | |
| 66-271, gnl|hg17|chr1 (176148996-176149181) | |
| 66-271, gnl|hg17|chr15 (98003261-98003497) | |
| 66-271, gnl|Hg17|chr15 (98003287-98003492) | |
| 66-271, gnl|loxAfr1|scaffold_7744 (39822-39629) | |
| 66-271, gnl|loxAfr1|scaffold_7744 (39597-39835) | |
| 66-271, gnl|mm7|chr3 (88270320-88270122) | |
| 66-271, gnl|mm7|chr7 (63157023-63156788) | |
| 66-271, gnl|Mm7|chr7 (63156996-63156791) | |
| 66-271, gnl|monDom2|scaffold_12 (61128168-61128366) | |
| 66-271, gnl|monDom2|scaffold_12 (61128402-61128157) | |
| 66-271, gnl|oryCun1|scaffold_199193 (3495-3693) | |
| 66-271, gnl|oryCun1|scaffold_199193 (3728-3484) | |
| 66-271, gnl|panTro1|chr1 (158543769-158543952) | |
| 66-271, gnl|panTro1|chr16 (99073910-99074147) | |
| 66-271, gnl|rheMac2|chr1 (191278783-191278598) | |
| 66-271, gnl|rheMac2|chr7 (79678810-79679046) | |
| 66-271, gnl|rn3|chr2 (12124371-12124176) | |
| 66-271, gnl|rn3|chr2 (12124149-12124382) | |
| 66-271, gnl|tetNig1|chr13 (2967588-2967786) | |
| 66-271, gnl|tetNig1|chr13 (2967788-2967577) | |
| 66-271, gnl|xenTro1|scaffold_208 (1539795-1539993) | |
| 66-271, gnl|xenTro1|scaffold_208 (1540005-1539784) | |
| 407-555, gnl|bosTau2|chr7 (2594511-2594363) | |
| 407-555, gnl|canFam2|chr20 (47019077-47018863) | |
| 407-555, gnl|echTel1|scaffold_301999 (38229-38440) | |
| 407-555, gnl|hg17|chr19 (19118828-19119036) | |
| 407-555, gnl|Hg17|chr19 (19118992-19118844) | |
| 407-555, gnl|loxAfr1|scaffold_114311 (1965-1747) | |
| 407-555, gnl|mm7|chr8 (68621390-68621217) | |
| 407-555, gnl|Mm7|chr8 (68621250-68621380) | |
| 407-555, gnl|monDom2|scaffold_75 (2022222-2022464) | |
| 407-555, gnl|panTro1|chr20 (20193171-20193379) | |
| 407-555, gnl|rheMac2|chr19 (18787614-18787822) | |
| 407-555, gnl|rn3|chr16 (19737248-19737427) |