Non-Coding RNA Search

Mixn-0002g06

Sequence:


               
               CTAGAGGAGGGCGAAGGAAGCTCGGAGCGACACTGCTCAGGAGAGGAGGGCAGTGAGGAG
CGAGGCGCGGGCAGAGGCAGCTCCGGCTGCCGAGAGGAGGGAGCGCGGCGCAGAGAGGAG
GGGCTTGCGGGCCCGTAGAAATGTCAATCAGAGCCCGGAGCCCCGGGAATCTCCGCCAAT
CTGTTCGGACCTGAGCTGGCTCCTTGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCGCCGA
GCAGATCAATAGGCGAACGCGGAGTGCAGCGCAGCGCGGGAGGCAGCGCGGCCCCAGCCC
GGCTCAGCCCCTGATGAGCGCCGGAGCCCGCGGGCG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAGAGGAGGGCGAAGGAAGCTCGGAGCGACACTGCTCAGGAGAGGAGGGCAGTGAGGAG
CGAGGCGCGGGCAGAGGCAGCTCCGGCTGCCGAGAGGAGGGAGCGCGGCGCAGAGAGGAG
GGGCTTGCGGGCCCGTAGAAATGTCAATCAGAGCCCGGAGCCCCGGGAATCTCCGCCAAT
CTGTTCGGACCTGAGCTGGCTCCTTGCCGCCGCCGCCGCCGCCGCCGCCGCTGCCGCCGA
GCAGATCAATAGGCGAACGCGGAGTGCAGCGCAGCGCGGGAGGCAGCGCGGCCCCAGCCC
GGCTCAGCCCCTGATGAGCGCCGGAGCCCGCGGGCG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               41-159, - strand, RNAz p=0.646845

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               41-159, - strand, RNAz p=0.646845

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-336, gnl|bosTau2|chrX (46107676-46107349)
               

               
               1-336, gnl|Hg17|chr16 (52877859-52877524)
               

               
               1-336, gnl|Mm7|chr8 (90394328-90394006)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-336, gnl|bosTau2|chrX (46107676-46107349)
               

               
               1-336, gnl|Hg17|chr16 (52877859-52877524)
               

               
               1-336, gnl|Mm7|chr8 (90394328-90394006)

	1-336, gnl\|bosTau2\|chrX (46107676-46107349)
	1-336, gnl\|Hg17\|chr16 (52877859-52877524)
	1-336, gnl\|Mm7\|chr8 (90394328-90394006)