Non-Coding RNA Search

Mixn-0002i10

Sequence:


               
               GCGCACTTGCCTGCCTGGAGGCTGCGCGGGCATCACCCGCAGGCCGAGCCCACTCCGGGG
TGACGCCGCGCGCCTCCCCGCGGCTTGGGCGCACGTGCCTGGGCTAAGGCCAGGGCTAGT
GGCCGCGCCGTAGTAGCTGGGGAGGGTGGGAGAGCTGGCTCCGGGCCCCGGCCGGCAGCC
GACCGCCGGCTCCGGTGGTTGGGCGGAGGAAGCGCGGGACTCCTCCTCCCCACCGTATTA
ACATGCACCTAGGGGCGGGTGAACAGCGCAGCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGCACTTGCCTGCCTGGAGGCTGCGCGGGCATCACCCGCAGGCCGAGCCCACTCCGGGG
TGACGCCGCGCGCCTCCCCGCGGCTTGGGCGCACGTGCCTGGGCTAAGGCCAGGGCTAGT
GGCCGCGCCGTAGTAGCTGGGGAGGGTGGGAGAGCTGGCTCCGGGCCCCGGCCGGCAGCC
GACCGCCGGCTCCGGTGGTTGGGCGGAGGAAGCGCGGGACTCCTCCTCCCCACCGTATTA
ACATGCACCTAGGGGCGGGTGAACAGCGCAGCCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               156-274, - strand, RNAz p=0.593787

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               156-274, - strand, RNAz p=0.593787

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               36-274, gnl|bosTau2|chr24 (27376539-27376779)
               

               
               36-274, gnl|Hg17|chr18 (4445564-4445298)
               

               
               36-274, gnl|Mm7|chr17 (68249330-68249579)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               36-274, gnl|bosTau2|chr24 (27376539-27376779)
               

               
               36-274, gnl|Hg17|chr18 (4445564-4445298)
               

               
               36-274, gnl|Mm7|chr17 (68249330-68249579)

	36-274, gnl\|bosTau2\|chr24 (27376539-27376779)
	36-274, gnl\|Hg17\|chr18 (4445564-4445298)
	36-274, gnl\|Mm7\|chr17 (68249330-68249579)