Non-Coding RNA Search

Mixn-0004d02

Sequence:


               
               CGGATCTGTGTCAAAATGATCAGATTTGGGTTGAATGAAATACATGATCAGAATCGGTGC
CATCTGTTTCTCTGTACTGCTTTAAGGTGCCTACTGGGAGACTGCACATAAACCATACAA
TGGGACTCACACTGAAATGACCCTGGGCGTGTGTGCCCGACGCCGCAGATTGGGTGGCAG
AGGGTCACAGAGCAAGCTGCCCCAAGCGAGCCCCGGCAGACACGGTGCCCCAGGCGGCTC
TGGCTTATCCAGGATCCCACACCAGGAAAGGTCGTGTTTCCTGAAGGTCACTGAAGGCGC
AGGGGTCCCCCGAGGATGGTTAGCAGCCAAGACTGGCCAATAATCAGTCAGTGGGTTTAT
ACTCAGGACTTTGTGCTCAGAACGTGGGGGCCTCCACCTGGGGCTTATCCCCCGCCAAGG
CCGTTCTGTGGGCCCGTCCCTTTTGGGGGGCTCTGAGGAGGGGAGCCTGCGGGGGGAGCG
AGGCACCTGTTGGCCAGCGAGATCACTCTGTTGGTGGCGTCCGCCTCCTGCTGGCACCTG
ATCTTCTCGGCTGTTGCTTTTTCAAAGGCCGACGTCAGGTTGCTCAGGTTGGCATTGAGT
TCGGCAATCTTGTTTTTGATGCGGGAGAGCTTCTCCTGCGCCTCGGCCAGCTCTGCGTTG
G

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGGATCTGTGTCAAAATGATCAGATTTGGGTTGAATGAAATACATGATCAGAATCGGTGC
CATCTGTTTCTCTGTACTGCTTTAAGGTGCCTACTGGGAGACTGCACATAAACCATACAA
TGGGACTCACACTGAAATGACCCTGGGCGTGTGTGCCCGACGCCGCAGATTGGGTGGCAG
AGGGTCACAGAGCAAGCTGCCCCAAGCGAGCCCCGGCAGACACGGTGCCCCAGGCGGCTC
TGGCTTATCCAGGATCCCACACCAGGAAAGGTCGTGTTTCCTGAAGGTCACTGAAGGCGC
AGGGGTCCCCCGAGGATGGTTAGCAGCCAAGACTGGCCAATAATCAGTCAGTGGGTTTAT
ACTCAGGACTTTGTGCTCAGAACGTGGGGGCCTCCACCTGGGGCTTATCCCCCGCCAAGG
CCGTTCTGTGGGCCCGTCCCTTTTGGGGGGCTCTGAGGAGGGGAGCCTGCGGGGGGAGCG
AGGCACCTGTTGGCCAGCGAGATCACTCTGTTGGTGGCGTCCGCCTCCTGCTGGCACCTG
ATCTTCTCGGCTGTTGCTTTTTCAAAGGCCGACGTCAGGTTGCTCAGGTTGGCATTGAGT
TCGGCAATCTTGTTTTTGATGCGGGAGAGCTTCTCCTGCGCCTCGGCCAGCTCTGCGTTG
G

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               478-602, + strand, RNAz p=0.932851

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               478-602, + strand, RNAz p=0.932851

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               355-602, gnl|bosTau2|chr19 (45883608-45883871)
               

               
               355-602, gnl|Hg17|chr17 (73966089-73966357)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               355-602, gnl|bosTau2|chr19 (45883608-45883871)
               

               
               355-602, gnl|Hg17|chr17 (73966089-73966357)

	355-602, gnl\|bosTau2\|chr19 (45883608-45883871)
	355-602, gnl\|Hg17\|chr17 (73966089-73966357)