Mixn-0004d04
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGGTAAGGATGGTGGTGAGGTGGTAGCCGTGCCGCAGCACCAGGTGGGCGCCCAGCACG TGCTGGTGCACGAGGCGCAGGTGGAAGTCGTAGCTGAACGAGTGCACGTGCATCAGGTCC CGCACCTTGTCGCACTCCTCTGTGAACAGCATGGACAGCTGCGAGTTGACAGCTTGCCCC ATGGGGATTCGGGAACATTCCAGAGCAAACTGTTTGACACAGAAGTAACAGCCCTGGAAA GCCAGCTCCATGAGGATGATGCCCCCGGGCAGTGCCCGCTGCAGGTGGTATGTGGTGACT GGAGAGCCAGAGCTCTTGGGGCTCCCGTCGGCCTTGGCTTTCGGGCAGGAGAAGGAGCCC CGACCCTCTGTTCCAAGGATGGCCATGGCCCGCAGCCGGCTGGTGCTGCGGGCGGGTGAG GGGGGCCGCAGCGGCACCAGCACAAAGCCCATGCTCTGCAGGTACTGCACGTACTGCTGC AGGAAAGCCAAGCTCAGCTCCTTCAGCCAAGGCTCCTCCCGGGCGCCTGGCGGAGGCCCG TCCGAGGAGTCTCAGCTTGCGGGGCCCTCTCGGCTCCCAACCCTGACTCAGGGCGATGGC GCCGCTGCCCCTCGGGGGGGCCAGAGGTCTCCGGGGGCCCGTGCAGCCAGGCCGCTGGGT C |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGGTAAGGATGGTGGTGAGGTGGTAGCCGTGCCGCAGCACCAGGTGGGCGCCCAGCACG TGCTGGTGCACGAGGCGCAGGTGGAAGTCGTAGCTGAACGAGTGCACGTGCATCAGGTCC CGCACCTTGTCGCACTCCTCTGTGAACAGCATGGACAGCTGCGAGTTGACAGCTTGCCCC ATGGGGATTCGGGAACATTCCAGAGCAAACTGTTTGACACAGAAGTAACAGCCCTGGAAA GCCAGCTCCATGAGGATGATGCCCCCGGGCAGTGCCCGCTGCAGGTGGTATGTGGTGACT GGAGAGCCAGAGCTCTTGGGGCTCCCGTCGGCCTTGGCTTTCGGGCAGGAGAAGGAGCCC CGACCCTCTGTTCCAAGGATGGCCATGGCCCGCAGCCGGCTGGTGCTGCGGGCGGGTGAG GGGGGCCGCAGCGGCACCAGCACAAAGCCCATGCTCTGCAGGTACTGCACGTACTGCTGC AGGAAAGCCAAGCTCAGCTCCTTCAGCCAAGGCTCCTCCCGGGCGCCTGGCGGAGGCCCG TCCGAGGAGTCTCAGCTTGCGGGGCCCTCTCGGCTCCCAACCCTGACTCAGGGCGATGGC GCCGCTGCCCCTCGGGGGGGCCAGAGGTCTCCGGGGGCCCGTGCAGCCAGGCCGCTGGGT C |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 7-125, + strand, RNAz p=0.632892 | |
| 510-607, - strand, RNAz p=0.982396 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 7-125, + strand, RNAz p=0.632892 | |
| 510-607, - strand, RNAz p=0.982396 |
| Predicted microRNA(s): 1 entry(ies) | More info |
| Predicted microRNA(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 481-584, - strand, RNAmicro p=0.981835 |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 7-161, gnl|bosTau2|chr3 (71802885-71802731) | |
| 7-161, gnl|canFam2|chr15 (19745003-19744738) | |
| 7-161, gnl|danRer3|chr22 (32680333-32680561) | |
| 7-161, gnl|echTel1|scaffold_321914 (74261-74519) | |
| 7-161, gnl|fr1|chrUn (254118110-254117865) | |
| 7-161, gnl|galGal2|chr8 (20062955-20063198) | |
| 7-161, gnl|hg17|chr1 (43581672-43581942) | |
| 7-161, gnl|Hg17|chr1 (43581870-43581716) | |
| 7-161, gnl|loxAfr1|scaffold_5124 (50226-50467) | |
| 7-161, gnl|mm7|chr4 (117742802-117742533) | |
| 7-161, gnl|Mm7|chr4 (117742603-117742757) | |
| 7-161, gnl|monDom2|scaffold_87 (12392-12134) | |
| 7-161, gnl|panTro1|chr1 (44561376-44561646) | |
| 7-161, gnl|rheMac2|chr1 (46354593-46354863) | |
| 7-161, gnl|rn3|chr5 (138852349-138852080) | |
| 7-161, gnl|tetNig1|chrUn_random (49641547-49641768) | |
| 7-161, gnl|xenTro1|scaffold_1 (5706202-5706459) | |
| 406-607, gnl|bosTau2|chr3 (71798365-71798163) | |
| 406-607, gnl|canFam2|chr15 (19749975-19749721) | |
| 406-607, gnl|danRer3|chr22 (32663941-32664174) | |
| 406-607, gnl|echTel1|scaffold_321914 (70396-70652) | |
| 406-607, gnl|fr1|chrUn (254122555-254122323) | |
| 406-607, gnl|galGal2|chr8 (20058548-20058773) | |
| 406-607, gnl|hg17|chr1 (43578337-43578595) | |
| 406-607, gnl|Hg17|chr1 (43578560-43578358) | |
| 406-607, gnl|loxAfr1|scaffold_5124 (45684-45940) | |
| 406-607, gnl|mm7|chr4 (117748484-117748227) | |
| 406-607, gnl|Mm7|chr4 (117748259-117748461) | |
| 406-607, gnl|monDom2|scaffold_87 (21017-20756) | |
| 406-607, gnl|oryCun1|scaffold_158185 (30221-29982) | |
| 406-607, gnl|panTro1|chr1 (44558049-44558307) | |
| 406-607, gnl|rn3|chr5 (138857211-138856957) | |
| 406-607, gnl|xenTro1|scaffold_1 (5700698-5700930) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 7-161, gnl|bosTau2|chr3 (71802885-71802731) | |
| 7-161, gnl|canFam2|chr15 (19745003-19744738) | |
| 7-161, gnl|danRer3|chr22 (32680333-32680561) | |
| 7-161, gnl|echTel1|scaffold_321914 (74261-74519) | |
| 7-161, gnl|fr1|chrUn (254118110-254117865) | |
| 7-161, gnl|galGal2|chr8 (20062955-20063198) | |
| 7-161, gnl|hg17|chr1 (43581672-43581942) | |
| 7-161, gnl|Hg17|chr1 (43581870-43581716) | |
| 7-161, gnl|loxAfr1|scaffold_5124 (50226-50467) | |
| 7-161, gnl|mm7|chr4 (117742802-117742533) | |
| 7-161, gnl|Mm7|chr4 (117742603-117742757) | |
| 7-161, gnl|monDom2|scaffold_87 (12392-12134) | |
| 7-161, gnl|panTro1|chr1 (44561376-44561646) | |
| 7-161, gnl|rheMac2|chr1 (46354593-46354863) | |
| 7-161, gnl|rn3|chr5 (138852349-138852080) | |
| 7-161, gnl|tetNig1|chrUn_random (49641547-49641768) | |
| 7-161, gnl|xenTro1|scaffold_1 (5706202-5706459) | |
| 406-607, gnl|bosTau2|chr3 (71798365-71798163) | |
| 406-607, gnl|canFam2|chr15 (19749975-19749721) | |
| 406-607, gnl|danRer3|chr22 (32663941-32664174) | |
| 406-607, gnl|echTel1|scaffold_321914 (70396-70652) | |
| 406-607, gnl|fr1|chrUn (254122555-254122323) | |
| 406-607, gnl|galGal2|chr8 (20058548-20058773) | |
| 406-607, gnl|hg17|chr1 (43578337-43578595) | |
| 406-607, gnl|Hg17|chr1 (43578560-43578358) | |
| 406-607, gnl|loxAfr1|scaffold_5124 (45684-45940) | |
| 406-607, gnl|mm7|chr4 (117748484-117748227) | |
| 406-607, gnl|Mm7|chr4 (117748259-117748461) | |
| 406-607, gnl|monDom2|scaffold_87 (21017-20756) | |
| 406-607, gnl|oryCun1|scaffold_158185 (30221-29982) | |
| 406-607, gnl|panTro1|chr1 (44558049-44558307) | |
| 406-607, gnl|rn3|chr5 (138857211-138856957) | |
| 406-607, gnl|xenTro1|scaffold_1 (5700698-5700930) |