Mixn-0004d05
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GGCAAATGAGCACAGACAGGCAAATACCCTCAAGGACAACCAGAGACAGAGACACCTCCA
GCACACCGAGGGACACGCCCAGGCACAGGCCGAGCCTCCTCAGCATTTCTCCAGTTCTGG
CTTGACCTACGGTGGGGGGAGGCATCAGTTACCGTCACTCCAGTTCTGCCCTGGTCCAAC
TGGTTTGGCTGTCCCAGAGGGTGTTGGAGTCCTTGTGGTGAACAGACAGACTAACAAGCA
GACAGACATATTACTTGGGAACAACAACAAAAAAGCAAAAGCCAGAGGTCATTGTCATAT
CTTGAAGAACTAGGAGGGAGAAAGAGCTGAATGGGCCATGGGAAGGCTAGGCTAGGACTG
ACTGGCCCACAGGCCAGACACAGCTAGGGGAAGCAGCAGATGTGGGTTCCAGGCCTGACA
CTGCTGTGTTACCTTGGATGGGTTGCTGCCTGTTGCTGGGTCTCTCTTCTGCTTCTAACA
AAGAGGGAGTTGCCGTTGGTGATTCTGAAGCAGTGAGATTCTCAAAGATACTGCAGCAGT
TGTATAAACAGGGAAGGGTCCTGGGAGCCTTGGGAGTCTGATTAGAATAATAAGAGCCCC
CTCCCCTCCTCGGAGACTCCCCCCCAAGCCTCCTCCCCCGCCTCTAGACCTGGGCTCTAC
TCTGGATTGAAGCACCAGAGGCCAGCAGCACCCCCTGCCCCCCAATACACACAAACACAT
GTG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GGCAAATGAGCACAGACAGGCAAATACCCTCAAGGACAACCAGAGACAGAGACACCTCCA
GCACACCGAGGGACACGCCCAGGCACAGGCCGAGCCTCCTCAGCATTTCTCCAGTTCTGG
CTTGACCTACGGTGGGGGGAGGCATCAGTTACCGTCACTCCAGTTCTGCCCTGGTCCAAC
TGGTTTGGCTGTCCCAGAGGGTGTTGGAGTCCTTGTGGTGAACAGACAGACTAACAAGCA
GACAGACATATTACTTGGGAACAACAACAAAAAAGCAAAAGCCAGAGGTCATTGTCATAT
CTTGAAGAACTAGGAGGGAGAAAGAGCTGAATGGGCCATGGGAAGGCTAGGCTAGGACTG
ACTGGCCCACAGGCCAGACACAGCTAGGGGAAGCAGCAGATGTGGGTTCCAGGCCTGACA
CTGCTGTGTTACCTTGGATGGGTTGCTGCCTGTTGCTGGGTCTCTCTTCTGCTTCTAACA
AAGAGGGAGTTGCCGTTGGTGATTCTGAAGCAGTGAGATTCTCAAAGATACTGCAGCAGT
TGTATAAACAGGGAAGGGTCCTGGGAGCCTTGGGAGTCTGATTAGAATAATAAGAGCCCC
CTCCCCTCCTCGGAGACTCCCCCCCAAGCCTCCTCCCCCGCCTCTAGACCTGGGCTCTAC
TCTGGATTGAAGCACCAGAGGCCAGCAGCACCCCCTGCCCCCCAATACACACAAACACAT
GTG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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585-689, - strand, RNAmicro p=0.943501 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
585-689, - strand, RNAmicro p=0.943501 |
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1-103, gnl|bosTau2|chr2 (79017259-79017359) |
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1-103, gnl|canFam2|chr2 (75658240-75658021) |
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1-103, gnl|dasNov1|scaffold_259626 (714-493) |
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1-103, gnl|hg17|chr1 (27538951-27539183) |
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1-103, gnl|Hg17|chr1 (27539145-27539025) |
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1-103, gnl|mm7|chr4 (132463637-132463449) |
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1-103, gnl|Mm7|chr4 (132463481-132463573) |
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1-103, gnl|panTro1|chr1_random (57213894-57214128) |
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1-103, gnl|rheMac2|chr1 (30211949-30212185) |
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1-103, gnl|rn3|chr5 (152037430-152037619) |
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1-103, gnl|xenTro1|scaffold_76 (1589941-1589726) |
| |
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182-723, gnl|bosTau2|chr27 (29073483-29074037) |
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182-723, gnl|Hg17|chr1 (27534411-27533896) |
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182-723, gnl|Mm7|chr4 (132468730-132469189) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-103, gnl|bosTau2|chr2 (79017259-79017359) |
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1-103, gnl|canFam2|chr2 (75658240-75658021) |
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1-103, gnl|dasNov1|scaffold_259626 (714-493) |
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1-103, gnl|hg17|chr1 (27538951-27539183) |
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1-103, gnl|Hg17|chr1 (27539145-27539025) |
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1-103, gnl|mm7|chr4 (132463637-132463449) |
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1-103, gnl|Mm7|chr4 (132463481-132463573) |
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1-103, gnl|panTro1|chr1_random (57213894-57214128) |
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1-103, gnl|rheMac2|chr1 (30211949-30212185) |
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1-103, gnl|rn3|chr5 (152037430-152037619) |
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1-103, gnl|xenTro1|scaffold_76 (1589941-1589726) |
| |
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182-723, gnl|bosTau2|chr27 (29073483-29074037) |
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182-723, gnl|Hg17|chr1 (27534411-27533896) |
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182-723, gnl|Mm7|chr4 (132468730-132469189) |
