Non-Coding RNA Search

Mixn-0006p07

Sequence:


               
               GGCGGCCGGGAGCGGGCGGCTAGCTGACCGCCCCGGGTTTGCCTGCGACGCGCCTCCCTC
CGCGGTCCCGCAGCTGGACGCCTGGTCCCACTGGGTGGGCCTGGTCGCCGCTTCTCCGGT
CTCCTTTATTCCTGCCTTAGGTCGAGTTCCTGATGCCGTTTCCGTTTGCTTCTCCAACTC
TCTCCCTGCGTTTTCAGCTGAAGCTTCCCTTTCAGGGAGTTACCTAACCACCTCCCGAAA
CTGTCGTTCAGCCTTTTGCCCAGTTCCTCTCATTAGGGGGAAAATTTCTTTGTTCGTTTG
TGTTTTTCCTCCCCTTTAATCCCAGAGAAATGCAGTGTGGAAGATTACGTCATCGCAATA
TAAGGGGTGAGAGTTTTTAACTCCTACAAGTCAGGGACTCACTAAATTAAGACAGCATTT
TGTAGCCTTGGTTGGGTCACCCATTGGCCTAGCCAACCTGTTTCCCAACGCATCAGAGAT
GATCTTTTGAAATCCTGGCCGTCTCATATGCATCTGAAAGCCAGGAGGGTTTAAAATCTC
CGGATCAACTTGTGCCAGAGAATAAAACGTAAGACAACACCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGGCCGGGAGCGGGCGGCTAGCTGACCGCCCCGGGTTTGCCTGCGACGCGCCTCCCTC
CGCGGTCCCGCAGCTGGACGCCTGGTCCCACTGGGTGGGCCTGGTCGCCGCTTCTCCGGT
CTCCTTTATTCCTGCCTTAGGTCGAGTTCCTGATGCCGTTTCCGTTTGCTTCTCCAACTC
TCTCCCTGCGTTTTCAGCTGAAGCTTCCCTTTCAGGGAGTTACCTAACCACCTCCCGAAA
CTGTCGTTCAGCCTTTTGCCCAGTTCCTCTCATTAGGGGGAAAATTTCTTTGTTCGTTTG
TGTTTTTCCTCCCCTTTAATCCCAGAGAAATGCAGTGTGGAAGATTACGTCATCGCAATA
TAAGGGGTGAGAGTTTTTAACTCCTACAAGTCAGGGACTCACTAAATTAAGACAGCATTT
TGTAGCCTTGGTTGGGTCACCCATTGGCCTAGCCAACCTGTTTCCCAACGCATCAGAGAT
GATCTTTTGAAATCCTGGCCGTCTCATATGCATCTGAAAGCCAGGAGGGTTTAAAATCTC
CGGATCAACTTGTGCCAGAGAATAAAACGTAAGACAACACCTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               414-511, - strand, RNAz p=0.668846

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               414-511, - strand, RNAz p=0.668846

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-583, gnl|bosTau2|chr2 (84881307-84880692)
               

               
               1-583, gnl|Hg17|chr1 (22125111-22125685)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-583, gnl|bosTau2|chr2 (84881307-84880692)
               

               
               1-583, gnl|Hg17|chr1 (22125111-22125685)

	1-583, gnl\|bosTau2\|chr2 (84881307-84880692)
	1-583, gnl\|Hg17\|chr1 (22125111-22125685)