Mixn-0007i10
|
CGAACATGCGTCCTCATGGTTCCCAGTCGATTCCTGGGCCGGGGATCCAGCCCGAGTCAC
AGCAGCGACGGCGTCAAACCCCTATGAATACTTCTGAGAGGAGAGCTCCACATACATCCT
TGAGATTTCATCAGCCGTGCTTTGGGGACAGTTCAGAACTTCTAACCTGCACGGTGACTT
CTTCAGTGGAAGCTCCCCCCCGGCTGTAGGAGGTGCGTCTGACAGGGTCGCTCTTTCTGC
AGGAGGAGCTGTGCCCGGCGACAGCACCTCCGCGGGACTGGCGCTCCGGAAGCTTCGAGA
CAGGGCACGGCTCTTGAACTTCCTGGTGGCGCGGCTCAGACGGAAGTCTGGCAGTGTCCT
CGGGAGCAGCCCATCTTCCTGGGGAACCACGCGGTTCCGTCGCCTTTTGCACATTCCCGC
GAGGCGATTTTCACGTGTCCTCTGAAGTCCGTGCTGCAGGAGCCCCTGGACGTGGACACC
GTCCAGCGAGAGCTTCCCCACGAGCTGGACCAGATGCACCTGGAGGTTCTGCAGCTGCGG
AGGCAGGTGGCTGAGCTGGAGCAGCATCTCGGGGCGGCCCGGAAGGAAGGCGGGGACACC
TTGGACACTGCGGGCCTCGGAGCAGAGGGCCCCACGGAGGCAGACGGAGGGCGTGCGGGC
ACCGGGGATCCGGGGGCACGGCCCCCCCAGGCCCTGTGTGTGCCCCGGCTCCAGAGGAAG
CTCAGGGAGGCGGCAAGGAAAATCCTGCGGCTGCGCCTGGAGAANGAGCAGCTCCTGGAG
CTGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGAACATGCGTCCTCATGGTTCCCAGTCGATTCCTGGGCCGGGGATCCAGCCCGAGTCAC
AGCAGCGACGGCGTCAAACCCCTATGAATACTTCTGAGAGGAGAGCTCCACATACATCCT
TGAGATTTCATCAGCCGTGCTTTGGGGACAGTTCAGAACTTCTAACCTGCACGGTGACTT
CTTCAGTGGAAGCTCCCCCCCGGCTGTAGGAGGTGCGTCTGACAGGGTCGCTCTTTCTGC
AGGAGGAGCTGTGCCCGGCGACAGCACCTCCGCGGGACTGGCGCTCCGGAAGCTTCGAGA
CAGGGCACGGCTCTTGAACTTCCTGGTGGCGCGGCTCAGACGGAAGTCTGGCAGTGTCCT
CGGGAGCAGCCCATCTTCCTGGGGAACCACGCGGTTCCGTCGCCTTTTGCACATTCCCGC
GAGGCGATTTTCACGTGTCCTCTGAAGTCCGTGCTGCAGGAGCCCCTGGACGTGGACACC
GTCCAGCGAGAGCTTCCCCACGAGCTGGACCAGATGCACCTGGAGGTTCTGCAGCTGCGG
AGGCAGGTGGCTGAGCTGGAGCAGCATCTCGGGGCGGCCCGGAAGGAAGGCGGGGACACC
TTGGACACTGCGGGCCTCGGAGCAGAGGGCCCCACGGAGGCAGACGGAGGGCGTGCGGGC
ACCGGGGATCCGGGGGCACGGCCCCCCCAGGCCCTGTGTGTGCCCCGGCTCCAGAGGAAG
CTCAGGGAGGCGGCAAGGAAAATCCTGCGGCTGCGCCTGGAGAANGAGCAGCTCCTGGAG
CTGG
|
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gi|61860182|ref|XP_594581.1| |
Protein identifier
|
gi|61860182|ref|XP_594581.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
187-352, gnl|bosTau2|chr19 (44363937-44363770) |
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187-352, gnl|canFam2|chr9 (3170459-3170281) |
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187-352, gnl|echTel1|scaffold_186454 (650-418) |
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187-352, gnl|hg17|chr17 (77714207-77714482) |
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187-352, gnl|Hg17|chr17 (77714542-77714358) |
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187-352, gnl|mm7|chr11 (120990700-120990950) |
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187-352, gnl|Mm7|chr11 (120991032-120990853) |
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187-352, gnl|panTro1|chr19 (81482747-81483022) |
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187-352, gnl|rheMac2|chr16 (77630039-77630298) |
| |
|
451-599, gnl|bosTau2|chr19 (44360963-44360815) |
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451-599, gnl|canFam2|chr9 (3175721-3175458) |
|
451-599, gnl|hg17|chr17 (77708909-77709226) |
|
451-599, gnl|Hg17|chr17 (77709113-77708965) |
|
451-599, gnl|loxAfr1|scaffold_155660 (791-475) |
|
451-599, gnl|mm7|chr11 (120987919-120988167) |
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451-599, gnl|Mm7|chr11 (120988093-120987971) |
|
451-599, gnl|oryCun1|scaffold_144838 (10146-9857) |
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451-599, gnl|rheMac2|chr16 (77623922-77624242) |
| |
|
640-784, gnl|bosTau2|chr19 (44355442-44355298) |
|
640-784, gnl|Hg17|chr17 (77702932-77702761) |
|
640-784, gnl|Mm7|chr11 (120982838-120982667) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
187-352, gnl|bosTau2|chr19 (44363937-44363770) |
|
187-352, gnl|canFam2|chr9 (3170459-3170281) |
|
187-352, gnl|echTel1|scaffold_186454 (650-418) |
|
187-352, gnl|hg17|chr17 (77714207-77714482) |
|
187-352, gnl|Hg17|chr17 (77714542-77714358) |
|
187-352, gnl|mm7|chr11 (120990700-120990950) |
|
187-352, gnl|Mm7|chr11 (120991032-120990853) |
|
187-352, gnl|panTro1|chr19 (81482747-81483022) |
|
187-352, gnl|rheMac2|chr16 (77630039-77630298) |
| |
|
451-599, gnl|bosTau2|chr19 (44360963-44360815) |
|
451-599, gnl|canFam2|chr9 (3175721-3175458) |
|
451-599, gnl|hg17|chr17 (77708909-77709226) |
|
451-599, gnl|Hg17|chr17 (77709113-77708965) |
|
451-599, gnl|loxAfr1|scaffold_155660 (791-475) |
|
451-599, gnl|mm7|chr11 (120987919-120988167) |
|
451-599, gnl|Mm7|chr11 (120988093-120987971) |
|
451-599, gnl|oryCun1|scaffold_144838 (10146-9857) |
|
451-599, gnl|rheMac2|chr16 (77623922-77624242) |
| |
|
640-784, gnl|bosTau2|chr19 (44355442-44355298) |
|
640-784, gnl|Hg17|chr17 (77702932-77702761) |
|
640-784, gnl|Mm7|chr11 (120982838-120982667) |
