Mixn-0008a02
|
GGAAAGATGCCTTCGCCACCGACACCCTCAGCGCCTACGATATCCTCTTTCACCAATGGC
TGCAGAGCCGGGAAGCCAAGCTCCGGCTCGCTGTGGTGGAGGCCCTGGGGCCCATGAGCC
ACCTGCTGCCCAGCGAGAAGCTGGAGGAACAGCTGCCCAAGCTCCTGCCTGGGGTCCTCG
CCCTCTACAAGAAACATGCCGAGACCGTCCACACGTCCAAGAGCCTGGCCCAGATCCTCG
AGGCGGCGGTGAGCGTGGGCAGCCGCACGCTGGAGGTCCAGCTCGACTCCGTCCTGGCCG
CGCTGCACGCTCAGGTCTGCGTGCCTGTGGAGTCGTCCAGCCCCCTGGTGATGAGCAACC
AGAAGGAGGTGCTGCGCTGCTTCACGGTGCTGGACTGCTGCTCGCCTGACCGCCTGCTGG
CCTTCCTACTGCCCAAGCTGGACTCCAGCAGCGAGAGGACCCGTGTGGGCACCCTGCAGG
TGCTGAGGCATCTCATCAAC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGAAAGATGCCTTCGCCACCGACACCCTCAGCGCCTACGATATCCTCTTTCACCAATGGC
TGCAGAGCCGGGAAGCCAAGCTCCGGCTCGCTGTGGTGGAGGCCCTGGGGCCCATGAGCC
ACCTGCTGCCCAGCGAGAAGCTGGAGGAACAGCTGCCCAAGCTCCTGCCTGGGGTCCTCG
CCCTCTACAAGAAACATGCCGAGACCGTCCACACGTCCAAGAGCCTGGCCCAGATCCTCG
AGGCGGCGGTGAGCGTGGGCAGCCGCACGCTGGAGGTCCAGCTCGACTCCGTCCTGGCCG
CGCTGCACGCTCAGGTCTGCGTGCCTGTGGAGTCGTCCAGCCCCCTGGTGATGAGCAACC
AGAAGGAGGTGCTGCGCTGCTTCACGGTGCTGGACTGCTGCTCGCCTGACCGCCTGCTGG
CCTTCCTACTGCCCAAGCTGGACTCCAGCAGCGAGAGGACCCGTGTGGGCACCCTGCAGG
TGCTGAGGCATCTCATCAAC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
79-221, gnl|bosTau2|chr14 (82833-82691) |
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79-221, gnl|Hg17|chr8 (145318489-145318746) |
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79-221, gnl|Mm7|chr15 (76490939-76491081) |
| |
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395-500, gnl|bosTau2|chr14 (79264-79159) |
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395-500, gnl|canFam2|chr13 (40691182-40691284) |
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395-500, gnl|danRer3|chr16 (30755177-30755280) |
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395-500, gnl|dasNov1|scaffold_258238 (1655-1545) |
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395-500, gnl|echTel1|scaffold_58783 (934-1029) |
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395-500, gnl|fr1|chrUn (119779337-119779219) |
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395-500, gnl|hg17|chr8 (145327284-145327402) |
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395-500, gnl|Hg17|chr8 (145327320-145327425) |
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395-500, gnl|loxAfr1|scaffold_28588 (237-150) |
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395-500, gnl|mm7|chr15 (76496733-76496855) |
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395-500, gnl|Mm7|chr15 (76496773-76496878) |
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395-500, gnl|oryCun1|scaffold_182729 (14718-14851) |
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395-500, gnl|panTro1|chr7 (148638562-148638680) |
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395-500, gnl|rheMac2|chr8 (146820088-146820206) |
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395-500, gnl|rn3|chr7 (114497222-114497352) |
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395-500, gnl|tetNig1|chr8 (3159335-3159447) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
79-221, gnl|bosTau2|chr14 (82833-82691) |
|
79-221, gnl|Hg17|chr8 (145318489-145318746) |
|
79-221, gnl|Mm7|chr15 (76490939-76491081) |
| |
|
395-500, gnl|bosTau2|chr14 (79264-79159) |
|
395-500, gnl|canFam2|chr13 (40691182-40691284) |
|
395-500, gnl|danRer3|chr16 (30755177-30755280) |
|
395-500, gnl|dasNov1|scaffold_258238 (1655-1545) |
|
395-500, gnl|echTel1|scaffold_58783 (934-1029) |
|
395-500, gnl|fr1|chrUn (119779337-119779219) |
|
395-500, gnl|hg17|chr8 (145327284-145327402) |
|
395-500, gnl|Hg17|chr8 (145327320-145327425) |
|
395-500, gnl|loxAfr1|scaffold_28588 (237-150) |
|
395-500, gnl|mm7|chr15 (76496733-76496855) |
|
395-500, gnl|Mm7|chr15 (76496773-76496878) |
|
395-500, gnl|oryCun1|scaffold_182729 (14718-14851) |
|
395-500, gnl|panTro1|chr7 (148638562-148638680) |
|
395-500, gnl|rheMac2|chr8 (146820088-146820206) |
|
395-500, gnl|rn3|chr7 (114497222-114497352) |
|
395-500, gnl|tetNig1|chr8 (3159335-3159447) |
