Non-Coding RNA Search

Mixn-0008o01

Sequence:


               
               CCGCAGATGCGGCCCTAGAAAAAAAGGCAAAGTTTCCTGGTAGCTCAGCAggttaaggat
ccagattgtcactgctgtggcgcaggttcaatccctggcccaggaatttctgcaCGGCAT
GGGGATAGCCAAAAAAAATTTTAACTAGATTAGCTTCTGTTTTCATCATTTTTGACAGTT
ATGGAGCTTTTGGTCATTACAAGTGAAACTATATTCCAGCCTGTGTTCTCAAGATAAATA
ACCCCTCTAACGACTATCTTACAGATCCACCATGATTACCAGGTTACTGGATCTCCTAAT
CTCAGTAAGTGGATACCATAGGATAACGATCTCAATATACTCACTGAGTCANNATCAGAC
AGAAGAATCTAGAGGTTTAAAACATTCTCACTAGTGTCATTTTTGACTGGTGTNGTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGCAGATGCGGCCCTAGAAAAAAAGGCAAAGTTTCCTGGTAGCTCAGCAggttaaggat
ccagattgtcactgctgtggcgcaggttcaatccctggcccaggaatttctgcaCGGCAT
GGGGATAGCCAAAAAAAATTTTAACTAGATTAGCTTCTGTTTTCATCATTTTTGACAGTT
ATGGAGCTTTTGGTCATTACAAGTGAAACTATATTCCAGCCTGTGTTCTCAAGATAAATA
ACCCCTCTAACGACTATCTTACAGATCCACCATGATTACCAGGTTACTGGATCTCCTAAT
CTCAGTAAGTGGATACCATAGGATAACGATCTCAATATACTCACTGAGTCANNATCAGAC
AGAAGAATCTAGAGGTTTAAAACATTCTCACTAGTGTCATTTTTGACTGGTGTNGTTT

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               34-107, tRNA Pseudo, RaveNnA Score=25.41

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               34-107, tRNA Pseudo, RaveNnA Score=25.41