Mixn-0009j16
|
GTTTTCCAAAGGCCTTTTAGCCAACACTCTTGTTGAAGATGTGAATATCTGTCTGCAAGC
CTGCAGCAGTCTACATGCTTTGTCCTCGTCTTTACCGGATGATCTTTTCAGAGGTGTGTT
GATGTTTGCCGTGTTCAACTAGTCCATAGTGGAACTCGTATTCGCCAGGCATTTGGAAAG
CTATTGAAGTCAATTCCTTTAGATGTTGTCTTGAGCAATAACAATCACACAGAAATTCAA
GAAATTTCTTTAGCATTAAGAAGTCACATGAGTAAAGCACCAAGTAATACATTCCACCCA
CAAGATTTCTCTGATGTTATTAGTTTTATTTTGTATGGGAACTCTCATAGAACGGGGAAG
GACAATTGGTTAGAAAGATTGTTCTACAGCTGCCAGAGACTGGATAAACGTGACCAATCA
ACAATTCCCCGCAATCTTCTAAAGACAGATGCTGTCCTTTGGCAGTGGGCTATTTGGGAA
GCAGCACAGTTCACTGTCCTTTCTAAGTTGAGAACTCCACTGGGCAGAGCTCAGGATACC
TTCCAGACAATTGAAGGTATCATCAGAAGTCTTGCAGCTCACACCTTAAACCCTGATCAG
GATGTTAGTCAGTGGACAACTGCAGACAATGATGAAGGCCACAGTAGCAACCAGCTTAGA
CTTGTGCTTCTTCTGCAGTATCTGGAAAACCTGGAGAAGTTAATGTATAATGCATATGAN
GGATGTGCCAATGCGTTGACATCACCCTCCCAGGTTTTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTTTTCCAAAGGCCTTTTAGCCAACACTCTTGTTGAAGATGTGAATATCTGTCTGCAAGC
CTGCAGCAGTCTACATGCTTTGTCCTCGTCTTTACCGGATGATCTTTTCAGAGGTGTGTT
GATGTTTGCCGTGTTCAACTAGTCCATAGTGGAACTCGTATTCGCCAGGCATTTGGAAAG
CTATTGAAGTCAATTCCTTTAGATGTTGTCTTGAGCAATAACAATCACACAGAAATTCAA
GAAATTTCTTTAGCATTAAGAAGTCACATGAGTAAAGCACCAAGTAATACATTCCACCCA
CAAGATTTCTCTGATGTTATTAGTTTTATTTTGTATGGGAACTCTCATAGAACGGGGAAG
GACAATTGGTTAGAAAGATTGTTCTACAGCTGCCAGAGACTGGATAAACGTGACCAATCA
ACAATTCCCCGCAATCTTCTAAAGACAGATGCTGTCCTTTGGCAGTGGGCTATTTGGGAA
GCAGCACAGTTCACTGTCCTTTCTAAGTTGAGAACTCCACTGGGCAGAGCTCAGGATACC
TTCCAGACAATTGAAGGTATCATCAGAAGTCTTGCAGCTCACACCTTAAACCCTGATCAG
GATGTTAGTCAGTGGACAACTGCAGACAATGATGAAGGCCACAGTAGCAACCAGCTTAGA
CTTGTGCTTCTTCTGCAGTATCTGGAAAACCTGGAGAAGTTAATGTATAATGCATATGAN
GGATGTGCCAATGCGTTGACATCACCCTCCCAGGTTTTC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
105-225, gnl|bosTau2|chr25 (11737396-11737516) |
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105-225, gnl|Hg17|chr16 (18789541-18789423) |
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105-225, gnl|Mm7|chr7 (114111754-114111634) |
| |
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356-559, gnl|bosTau2|chr25 (11738713-11738916) |
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356-559, gnl|canFam2|chr6 (29280381-29280157) |
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356-559, gnl|danRer3|chr3 (26340998-26341229) |
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356-559, gnl|dasNov1|scaffold_1470 (65556-65780) |
|
356-559, gnl|echTel1|scaffold_166557 (6337-6107) |
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356-559, gnl|fr1|chrUn (267828560-267828800) |
|
356-559, gnl|galGal2|chr14 (10530197-10530401) |
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356-559, gnl|hg17|chr16 (18787918-18788129) |
|
356-559, gnl|Hg17|chr16 (18788127-18787924) |
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356-559, gnl|mm7|chr7 (114107918-114108142) |
|
356-559, gnl|Mm7|chr7 (114108140-114107937) |
|
356-559, gnl|monDom2|scaffold_19 (38888666-38888885) |
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356-559, gnl|panTro1|chr18 (30083263-30083474) |
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356-559, gnl|rheMac2|chr20 (17854635-17854846) |
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356-559, gnl|rn3|chr1 (176534354-176534578) |
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356-559, gnl|tetNig1|chr3_random (48732-48970) |
|
356-559, gnl|xenTro1|scaffold_214 (1441328-1441117) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
105-225, gnl|bosTau2|chr25 (11737396-11737516) |
|
105-225, gnl|Hg17|chr16 (18789541-18789423) |
|
105-225, gnl|Mm7|chr7 (114111754-114111634) |
| |
|
356-559, gnl|bosTau2|chr25 (11738713-11738916) |
|
356-559, gnl|canFam2|chr6 (29280381-29280157) |
|
356-559, gnl|danRer3|chr3 (26340998-26341229) |
|
356-559, gnl|dasNov1|scaffold_1470 (65556-65780) |
|
356-559, gnl|echTel1|scaffold_166557 (6337-6107) |
|
356-559, gnl|fr1|chrUn (267828560-267828800) |
|
356-559, gnl|galGal2|chr14 (10530197-10530401) |
|
356-559, gnl|hg17|chr16 (18787918-18788129) |
|
356-559, gnl|Hg17|chr16 (18788127-18787924) |
|
356-559, gnl|mm7|chr7 (114107918-114108142) |
|
356-559, gnl|Mm7|chr7 (114108140-114107937) |
|
356-559, gnl|monDom2|scaffold_19 (38888666-38888885) |
|
356-559, gnl|panTro1|chr18 (30083263-30083474) |
|
356-559, gnl|rheMac2|chr20 (17854635-17854846) |
|
356-559, gnl|rn3|chr1 (176534354-176534578) |
|
356-559, gnl|tetNig1|chr3_random (48732-48970) |
|
356-559, gnl|xenTro1|scaffold_214 (1441328-1441117) |
