Mixn-0009p02
|
GGAACTTCTGGCTGCGTCTGTAAAGGGTGACGCCGATGACCAGGACTGCAACGGCTACGA
CTGCAGCTCCCAAGCCTGAGTACAAAGCAATGTCGCTGGCGTTCTCAATACCTCTCCTAC
TCCATCTTTGGGGTTTTATTTCATGAAGAGGTTTTTTATCTAGGATGCAGAGGCCATCTG
TACAGTTTTCAGATTCCTGGCTGAGACCTTCGCAGAATTTGCCTCCGTTTCTCGGGGGCG
GGGCCGTGCACTCCCGGATGCGCAAATGCTCGCACTCTGGACTGCAGACTGACCACTCAC
TCCACACTTCCCAGCTCCCATCCACAGGACAGAGAGAAGTGCAGGTTATTTTCTGCACTG
ACATTCCCTCACAAAAGGCCCCACCATTGAGAGGAGCTGGATTGGTGCAGGTCCGGGAAC
GTTTCTGCCATCCTCTACCACAGCGAACATTGCAGGCTGACCACTCTGTCCAGGAAGACC
AGCCTCCATTCACATAAACCACCACTGTGGCCGACAGGCTCCTCCTCTTGGCCACGATGT
TGGCTGCCATGCAGGTGTAATTCCCTGAATCCGAGAGCCGCGCCTGCCTGATGATGAGGT
TGTGGTCTGCCCTGGTATCAATGTTCTCATCTTGTTCAGAGTCAATGGGCTCCTCGTTTT
TCAGCCATTCCACCTCTGCAGCAGGAACCCCCTCCGGCGGGCGGCAGTGCAGCACGATCA
TGCCTTCCAGGGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGAACTTCTGGCTGCGTCTGTAAAGGGTGACGCCGATGACCAGGACTGCAACGGCTACGA
CTGCAGCTCCCAAGCCTGAGTACAAAGCAATGTCGCTGGCGTTCTCAATACCTCTCCTAC
TCCATCTTTGGGGTTTTATTTCATGAAGAGGTTTTTTATCTAGGATGCAGAGGCCATCTG
TACAGTTTTCAGATTCCTGGCTGAGACCTTCGCAGAATTTGCCTCCGTTTCTCGGGGGCG
GGGCCGTGCACTCCCGGATGCGCAAATGCTCGCACTCTGGACTGCAGACTGACCACTCAC
TCCACACTTCCCAGCTCCCATCCACAGGACAGAGAGAAGTGCAGGTTATTTTCTGCACTG
ACATTCCCTCACAAAAGGCCCCACCATTGAGAGGAGCTGGATTGGTGCAGGTCCGGGAAC
GTTTCTGCCATCCTCTACCACAGCGAACATTGCAGGCTGACCACTCTGTCCAGGAAGACC
AGCCTCCATTCACATAAACCACCACTGTGGCCGACAGGCTCCTCCTCTTGGCCACGATGT
TGGCTGCCATGCAGGTGTAATTCCCTGAATCCGAGAGCCGCGCCTGCCTGATGATGAGGT
TGTGGTCTGCCCTGGTATCAATGTTCTCATCTTGTTCAGAGTCAATGGGCTCCTCGTTTT
TCAGCCATTCCACCTCTGCAGCAGGAACCCCCTCCGGCGGGCGGCAGTGCAGCACGATCA
TGCCTTCCAGGGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
156-325, gnl|bosTau2|chr27 (20577662-20577493) |
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156-325, gnl|canFam2|chr16 (32259662-32259526) |
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156-325, gnl|danRer3|chr5 (21087644-21087524) |
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156-325, gnl|dasNov1|scaffold_621 (2145-2008) |
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156-325, gnl|echTel1|scaffold_274305 (6030-5893) |
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156-325, gnl|fr1|chrUn (80299722-80299588) |
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156-325, gnl|galGal2|chrUn (8799174-8799032) |
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156-325, gnl|hg17|chr8 (35663576-35663713) |
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156-325, gnl|Hg17|chr8 (35663773-35663604) |
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156-325, gnl|loxAfr1|scaffold_12762 (90209-90065) |
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156-325, gnl|mm7|chr8 (27510544-27510407) |
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156-325, gnl|Mm7|chr8 (27510345-27510514) |
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156-325, gnl|monDom2|scaffold_1 (88188558-88188422) |
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156-325, gnl|oryCun1|scaffold_200489 (121180-121045) |
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156-325, gnl|panTro1|chr7 (36875259-36875396) |
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156-325, gnl|rheMac2|chr8 (36052785-36052922) |
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156-325, gnl|rn3|chr16 (67560486-67560623) |
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156-325, gnl|tetNig1|chrUn_random (2041874-2041788) |
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156-325, gnl|xenTro1|scaffold_5 (2816789-2816658) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
156-325, gnl|bosTau2|chr27 (20577662-20577493) |
|
156-325, gnl|canFam2|chr16 (32259662-32259526) |
|
156-325, gnl|danRer3|chr5 (21087644-21087524) |
|
156-325, gnl|dasNov1|scaffold_621 (2145-2008) |
|
156-325, gnl|echTel1|scaffold_274305 (6030-5893) |
|
156-325, gnl|fr1|chrUn (80299722-80299588) |
|
156-325, gnl|galGal2|chrUn (8799174-8799032) |
|
156-325, gnl|hg17|chr8 (35663576-35663713) |
|
156-325, gnl|Hg17|chr8 (35663773-35663604) |
|
156-325, gnl|loxAfr1|scaffold_12762 (90209-90065) |
|
156-325, gnl|mm7|chr8 (27510544-27510407) |
|
156-325, gnl|Mm7|chr8 (27510345-27510514) |
|
156-325, gnl|monDom2|scaffold_1 (88188558-88188422) |
|
156-325, gnl|oryCun1|scaffold_200489 (121180-121045) |
|
156-325, gnl|panTro1|chr7 (36875259-36875396) |
|
156-325, gnl|rheMac2|chr8 (36052785-36052922) |
|
156-325, gnl|rn3|chr16 (67560486-67560623) |
|
156-325, gnl|tetNig1|chrUn_random (2041874-2041788) |
|
156-325, gnl|xenTro1|scaffold_5 (2816789-2816658) |
