Non-Coding RNA Search

Mixn-0010a12

Sequence:


               
               GTTTGGATGCCTAGCAGGCTGATCCACATTATGTAATTAGCATCTCTTCTTGAGACCCAT
ATGGATTATGGAGGAGTTCGACATATGGTGTAATGAGGCACTGATTGCAGGCAGTGTGGT
TGGAAGAAATGAACAGTGTGTGTGGGGGATGGGGTGGGGGAGGTTTAAAGACCTGGAAAT
AAAAATATATCAAGTAATACAATGTTGGGGTATATGGATGGGAAGCCTCATTAGCAGGCC
GATCAACAGTATTTACTGGCAGAAGTAACACTCATTGAGTGCAATTGTGGGCCAAGCGTA
TTGCTCTGTGTCCCCCATACATGTCTTCCAACTCTTCCAGAAAACCTGGAATATAGGTAT
TTTATTATTATTCTCTATTTTATACAGGAACAATGAAGCTTAGAGATTAAAAAACATGCC
CAAGGTCATTGCCATAGCTGTGGCATAGGTCGCAGTTGCAGCTCTGATTCATTCCCTGGC
CTGNGAAGTTCTATATGTTGCAGGTGCAGCCGTAAAATTAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTGGATGCCTAGCAGGCTGATCCACATTATGTAATTAGCATCTCTTCTTGAGACCCAT
ATGGATTATGGAGGAGTTCGACATATGGTGTAATGAGGCACTGATTGCAGGCAGTGTGGT
TGGAAGAAATGAACAGTGTGTGTGGGGGATGGGGTGGGGGAGGTTTAAAGACCTGGAAAT
AAAAATATATCAAGTAATACAATGTTGGGGTATATGGATGGGAAGCCTCATTAGCAGGCC
GATCAACAGTATTTACTGGCAGAAGTAACACTCATTGAGTGCAATTGTGGGCCAAGCGTA
TTGCTCTGTGTCCCCCATACATGTCTTCCAACTCTTCCAGAAAACCTGGAATATAGGTAT
TTTATTATTATTCTCTATTTTATACAGGAACAATGAAGCTTAGAGATTAAAAAACATGCC
CAAGGTCATTGCCATAGCTGTGGCATAGGTCGCAGTTGCAGCTCTGATTCATTCCCTGGC
CTGNGAAGTTCTATATGTTGCAGGTGCAGCCGTAAAATTAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               316-428, - strand, RNAz p=0.882143

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               316-428, - strand, RNAz p=0.882143

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-428, gnl|bosTau2|chr22 (23597739-23598144)
               

               
               2-428, gnl|Hg17|chr3 (69117250-69116825)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-428, gnl|bosTau2|chr22 (23597739-23598144)
               

               
               2-428, gnl|Hg17|chr3 (69117250-69116825)

	2-428, gnl\|bosTau2\|chr22 (23597739-23598144)
	2-428, gnl\|Hg17\|chr3 (69117250-69116825)