Non-Coding RNA Search

Mixn-0010l15

Sequence:


               
               GTTTAACTGTCACTCCCAGTGTGCTGACCATTCAAAGTTCAGCAACACCTGTTAAAGTCC
CCGCTCCTGGTGAATTTGGTAACCACAGACCGAAAGGAGCCCTGAGACCTGGAAACAGCC
CTGAGAGCTTATTGGGTCAGGGGCCCACTCAGCAGCCTCCGCAGCAGCATAGGGTACTTC
AGCAACTACAGCAGGGAGATTGGAGATTGCAGCAACTTCATTTGCAGCATCGTCATCCTC
ACCAGCAGCAGCAGCAGCAGCAGCAGCTACTTCAGGATGCTTATATGCAGCAGTACCAGC
ATGCAGTGCAACAGCAGCAGATACTGCAACAGCAGTTTTTAATGCATTCGGTGTATCAGC
CACAAGCGTCTGCATCGCCTTATCCCGCAATGATGCAGCAGTATCAGCAGGCTTTCCTGC
AGCAGCAAATGCTCACTCAACGTCAGCAGTCTCCACAGCAGGCATCACCAGAGTATCTCA
CCTCCCCTCAAGAGTTCTCACCAGCCTTGGTGTCCTACACGTCGTCACTCCCAGCTCAGG
TTGGAACCGTAATGGACTCCTCTCATTGTGCCAATAGGTCAGTTGCTGATAAAGAGGCCA
TTGCTGCAGATACTACAAATCAGAAGAACATCAGTAACCCACCTGATATGTCAGGGTGGA
ATCCTTTTGGAGAGGATAATTTCTCCAAGTTAACAGAAGAGGAACTGTTGGACAGAGAAT
TTGACCTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTAACTGTCACTCCCAGTGTGCTGACCATTCAAAGTTCAGCAACACCTGTTAAAGTCC
CCGCTCCTGGTGAATTTGGTAACCACAGACCGAAAGGAGCCCTGAGACCTGGAAACAGCC
CTGAGAGCTTATTGGGTCAGGGGCCCACTCAGCAGCCTCCGCAGCAGCATAGGGTACTTC
AGCAACTACAGCAGGGAGATTGGAGATTGCAGCAACTTCATTTGCAGCATCGTCATCCTC
ACCAGCAGCAGCAGCAGCAGCAGCAGCTACTTCAGGATGCTTATATGCAGCAGTACCAGC
ATGCAGTGCAACAGCAGCAGATACTGCAACAGCAGTTTTTAATGCATTCGGTGTATCAGC
CACAAGCGTCTGCATCGCCTTATCCCGCAATGATGCAGCAGTATCAGCAGGCTTTCCTGC
AGCAGCAAATGCTCACTCAACGTCAGCAGTCTCCACAGCAGGCATCACCAGAGTATCTCA
CCTCCCCTCAAGAGTTCTCACCAGCCTTGGTGTCCTACACGTCGTCACTCCCAGCTCAGG
TTGGAACCGTAATGGACTCCTCTCATTGTGCCAATAGGTCAGTTGCTGATAAAGAGGCCA
TTGCTGCAGATACTACAAATCAGAAGAACATCAGTAACCCACCTGATATGTCAGGGTGGA
ATCCTTTTGGAGAGGATAATTTCTCCAAGTTAACAGAAGAGGAACTGTTGGACAGAGAAT
TTGACCTTCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|22003805|gb|AAM88867.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|22003805|gb|AAM88867.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               95-255, gnl|bosTau2|chr19 (35938023-35937863)
               

               
               95-255, gnl|Hg17|chr4 (80149114-80149274)
               

               
               95-255, gnl|Mm7|chr5 (96274754-96274980)
               


               
               392-583, gnl|bosTau2|chr19 (35935831-35935640)
               

               
               392-583, gnl|Hg17|chr4 (80150946-80151137)
               

               
               392-583, gnl|Mm7|chr5 (96278178-96278369)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               95-255, gnl|bosTau2|chr19 (35938023-35937863)
               

               
               95-255, gnl|Hg17|chr4 (80149114-80149274)
               

               
               95-255, gnl|Mm7|chr5 (96274754-96274980)
               


               
               392-583, gnl|bosTau2|chr19 (35935831-35935640)
               

               
               392-583, gnl|Hg17|chr4 (80150946-80151137)
               

               
               392-583, gnl|Mm7|chr5 (96278178-96278369)

	95-255, gnl\|bosTau2\|chr19 (35938023-35937863)
	95-255, gnl\|Hg17\|chr4 (80149114-80149274)
	95-255, gnl\|Mm7\|chr5 (96274754-96274980)

	392-583, gnl\|bosTau2\|chr19 (35935831-35935640)
	392-583, gnl\|Hg17\|chr4 (80150946-80151137)
	392-583, gnl\|Mm7\|chr5 (96278178-96278369)