Mixn-0011k22
|
GGGACTGGGGGCCACCGGGTGACAGGAGTGGATGGCGGAAGCTGAAGACAGGGGAACTGC
TGCCGCTGTTGTTCTGAGGGGGAGAGGCCTCTGTGGCCCGGGGGGAGGCGGCATGACCAT
CAGGCAGATCCTTGACCTGTACGAAGTCAGGCTTCAGCACCTCAAAGCACATGAACAACT
CAGCTAGCAGCACCATCAGGTTGACCTTGAGGGGCGGTGGGACATAGAGCAGGTCCTCAA
GAGACAGCGGGCAGCCACGAGGAAGGCGAGAGGCGCAGAAATCCTGCACCAGCTGGAGGT
TGTACAGGCTGTCCGCCACAGACATGGGGTCCTTGAGGCACACCTCTTCGAGTCGCAAGA
GCTGAGGACAATAGCAGTGGATGGTGGCAGCCAGCGCGGCCCCACTTGCCAGGTCCTGGA
GGCTGGTCACGGTCGGAAAGCAGGGGGCGCGTCGGGCCACGGCGCGGTCCTTGCGATAGC
GGATGAAGGTTGCGCTGGGGCCACCCCATCTGCAGGGGCCGCAGGAGATGCTCTCTGGGC
AGCTTCTTGGCTCCGTCTTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GGGACTGGGGGCCACCGGGTGACAGGAGTGGATGGCGGAAGCTGAAGACAGGGGAACTGC
TGCCGCTGTTGTTCTGAGGGGGAGAGGCCTCTGTGGCCCGGGGGGAGGCGGCATGACCAT
CAGGCAGATCCTTGACCTGTACGAAGTCAGGCTTCAGCACCTCAAAGCACATGAACAACT
CAGCTAGCAGCACCATCAGGTTGACCTTGAGGGGCGGTGGGACATAGAGCAGGTCCTCAA
GAGACAGCGGGCAGCCACGAGGAAGGCGAGAGGCGCAGAAATCCTGCACCAGCTGGAGGT
TGTACAGGCTGTCCGCCACAGACATGGGGTCCTTGAGGCACACCTCTTCGAGTCGCAAGA
GCTGAGGACAATAGCAGTGGATGGTGGCAGCCAGCGCGGCCCCACTTGCCAGGTCCTGGA
GGCTGGTCACGGTCGGAAAGCAGGGGGCGCGTCGGGCCACGGCGCGGTCCTTGCGATAGC
GGATGAAGGTTGCGCTGGGGCCACCCCATCTGCAGGGGCCGCAGGAGATGCTCTCTGGGC
AGCTTCTTGGCTCCGTCTTC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
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204-347, gnl|bosTau2|chr7 (12363403-12363260) |
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204-347, gnl|canFam2|chr20 (55387148-55387318) |
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204-347, gnl|danRer3|chr8 (20952589-20952442) |
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204-347, gnl|dasNov1|scaffold_208237 (3521-3351) |
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204-347, gnl|echTel1|scaffold_59658 (320-489) |
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204-347, gnl|fr1|chrUn (189952845-189953004) |
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204-347, gnl|galGal2|chr17 (2227077-2226907) |
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204-347, gnl|hg17|chr19 (7581340-7581510) |
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204-347, gnl|Hg17|chr19 (7581503-7581360) |
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204-347, gnl|loxAfr1|scaffold_139078 (29545-29716) |
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204-347, gnl|mm7|chr8 (3564422-3564592) |
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204-347, gnl|Mm7|chr8 (3564585-3564442) |
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204-347, gnl|monDom2|scaffold_54 (547807-547640) |
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204-347, gnl|oryCun1|scaffold_186401 (35011-35155) |
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204-347, gnl|panTro1|chr20 (7931258-7931428) |
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204-347, gnl|rheMac2|chr19 (7561308-7561478) |
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204-347, gnl|rn3|chr12 (2554825-2554655) |
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204-347, gnl|tetNig1|chr18 (9142443-9142293) |
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204-347, gnl|xenTro1|scaffold_903 (169718-169882) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
204-347, gnl|bosTau2|chr7 (12363403-12363260) |
|
204-347, gnl|canFam2|chr20 (55387148-55387318) |
|
204-347, gnl|danRer3|chr8 (20952589-20952442) |
|
204-347, gnl|dasNov1|scaffold_208237 (3521-3351) |
|
204-347, gnl|echTel1|scaffold_59658 (320-489) |
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204-347, gnl|fr1|chrUn (189952845-189953004) |
|
204-347, gnl|galGal2|chr17 (2227077-2226907) |
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204-347, gnl|hg17|chr19 (7581340-7581510) |
|
204-347, gnl|Hg17|chr19 (7581503-7581360) |
|
204-347, gnl|loxAfr1|scaffold_139078 (29545-29716) |
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204-347, gnl|mm7|chr8 (3564422-3564592) |
|
204-347, gnl|Mm7|chr8 (3564585-3564442) |
|
204-347, gnl|monDom2|scaffold_54 (547807-547640) |
|
204-347, gnl|oryCun1|scaffold_186401 (35011-35155) |
|
204-347, gnl|panTro1|chr20 (7931258-7931428) |
|
204-347, gnl|rheMac2|chr19 (7561308-7561478) |
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204-347, gnl|rn3|chr12 (2554825-2554655) |
|
204-347, gnl|tetNig1|chr18 (9142443-9142293) |
|
204-347, gnl|xenTro1|scaffold_903 (169718-169882) |
