Non-Coding RNA Search

Mixn-0012e03

Sequence:


               
               gagctacagctgccggcatacatcacggccacagcaacttgggatccgagccgcatcttc
gacctacaccacagctcacagtaatgccggatccttagcctactgagcgaggccagagat
cgaactcgcagcttcatgcttcctagtcagattcgttaaccactgagccacgacgggagc
tcTTGTGTCTGGTTTTTCTACCTGAGAGCACCACTGTGAATTGAGCTTATTTCCACGGTG
CCTTTTTCATCCTTGATGCTTCAGATACACAGATAACAGGGGACACAATTCTTTAAACAT
GGAAATTGGCCTTTATTTCTATGAGGCTCCAGGGAAACGTCCTGTTACTTCCTCTTTCTT
CACTTTATCACATTCATGTTGTCTTATTTCTCCTTGGCTTTGTGTCAGTTGGATGTTACC
TCCTCCAGATATTATTGATAAAAATGTTAAAGTTTATCCTGTGTGGAACTACTAGGCTGT
CAAGCCTGGAGAGGTGAAATTTGGTTAGAAACAAAAATCAAATTTCTGTTGTGGCCGCCA
CTGGTACTTTCTCTGAGAGCCCCTTTCCCTCTCTGCCCACTGCCCTCACTACACAAGAAA
AACTCACACAGTTCCCAAAGTGCTGATAATAGTTCATGACAAAGAATACACTTGTGAAGT
TAGGGACTTCCTGGGTTTATTTGATCCTCANGAAAGGCTTGTTTTTCCCANNAAGAATGT
ATATAAACATAGAATTTTTAAATTCATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               gagctacagctgccggcatacatcacggccacagcaacttgggatccgagccgcatcttc
gacctacaccacagctcacagtaatgccggatccttagcctactgagcgaggccagagat
cgaactcgcagcttcatgcttcctagtcagattcgttaaccactgagccacgacgggagc
tcTTGTGTCTGGTTTTTCTACCTGAGAGCACCACTGTGAATTGAGCTTATTTCCACGGTG
CCTTTTTCATCCTTGATGCTTCAGATACACAGATAACAGGGGACACAATTCTTTAAACAT
GGAAATTGGCCTTTATTTCTATGAGGCTCCAGGGAAACGTCCTGTTACTTCCTCTTTCTT
CACTTTATCACATTCATGTTGTCTTATTTCTCCTTGGCTTTGTGTCAGTTGGATGTTACC
TCCTCCAGATATTATTGATAAAAATGTTAAAGTTTATCCTGTGTGGAACTACTAGGCTGT
CAAGCCTGGAGAGGTGAAATTTGGTTAGAAACAAAAATCAAATTTCTGTTGTGGCCGCCA
CTGGTACTTTCTCTGAGAGCCCCTTTCCCTCTCTGCCCACTGCCCTCACTACACAAGAAA
AACTCACACAGTTCCCAAAGTGCTGATAATAGTTCATGACAAAGAATACACTTGTGAAGT
TAGGGACTTCCTGGGTTTATTTGATCCTCANGAAAGGCTTGTTTTTCCCANNAAGAATGT
ATATAAACATAGAATTTTTAAATTCATT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               456-573, + strand, RNAz p=0.651748

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               456-573, + strand, RNAz p=0.651748

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               184-746, gnl|bosTau2|chr9 (44862471-44863013)
               

               
               184-746, gnl|Mm7|chr10 (18264136-18263627)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               184-746, gnl|bosTau2|chr9 (44862471-44863013)
               

               
               184-746, gnl|Mm7|chr10 (18264136-18263627)

	184-746, gnl\|bosTau2\|chr9 (44862471-44863013)
	184-746, gnl\|Mm7\|chr10 (18264136-18263627)