Non-Coding RNA Search

Mixn-0012i20

Sequence:


               
               CACACGCACACACACATGCTATTCACACGGATTCTAGAACCAGCAGAGCAAAAGCTCTCT
GGCAGCAGAGCCCGCCTGCGCCGCCAGCCCCTGGCACCCACTCTGGTGTCACATTCCAGT
CTCAGATCCCAGTGACCCGCCCAGGCGCAGGGCACAGTTCTGCCTCAATCCGCGGGGAAA
CAGGACCAGCCAGTTTCTCCTCGGCCCCCACAGGGAGCAGCCTGGGGCCACAGACGGACA
CGGCCCCCTGAGGGCGCCCCCAGAATCACCAAGATCCGACAGGGGCCCCAGAAGCCGCGC
CCGCCCCATCTCCTCCTCCTCCTCCTCGTCTGGCCCTTCCTGCCAGGAGGACCAGGGGGC
ACCCCGAGGCCCCGGCCTTGCCCTTGGAGCAGGGGCCGCAGGGAGGAGGCTCTGGCCTCC
CGGGGAGAACAGACGCTGTCGGAATTTGGTGACAAACGCCGAGCCTCAGCCTAGACAGAG
GGGGATGACTCAATTCTACCGTGGAGGTCAGAGGAGGAGGAGACAGGACGTCTGTCTCGG
TCTCGGGAGGCAGCCCAGGTGGAAGGGGCGGCGCGGGCAAAGGCACCGAGGCAGGCAGTC
CGGGGCTCTGCTGCAGCANGAGGGGAAGGGGCCTGGCTGGNGGCGGAACAGGCCCCGGCG
GCCCGGACCTCCCTTCAGAGGGCAGCGGGGGCCCTGGGAGGTTGCTGGGGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACACGCACACACACATGCTATTCACACGGATTCTAGAACCAGCAGAGCAAAAGCTCTCT
GGCAGCAGAGCCCGCCTGCGCCGCCAGCCCCTGGCACCCACTCTGGTGTCACATTCCAGT
CTCAGATCCCAGTGACCCGCCCAGGCGCAGGGCACAGTTCTGCCTCAATCCGCGGGGAAA
CAGGACCAGCCAGTTTCTCCTCGGCCCCCACAGGGAGCAGCCTGGGGCCACAGACGGACA
CGGCCCCCTGAGGGCGCCCCCAGAATCACCAAGATCCGACAGGGGCCCCAGAAGCCGCGC
CCGCCCCATCTCCTCCTCCTCCTCCTCGTCTGGCCCTTCCTGCCAGGAGGACCAGGGGGC
ACCCCGAGGCCCCGGCCTTGCCCTTGGAGCAGGGGCCGCAGGGAGGAGGCTCTGGCCTCC
CGGGGAGAACAGACGCTGTCGGAATTTGGTGACAAACGCCGAGCCTCAGCCTAGACAGAG
GGGGATGACTCAATTCTACCGTGGAGGTCAGAGGAGGAGGAGACAGGACGTCTGTCTCGG
TCTCGGGAGGCAGCCCAGGTGGAAGGGGCGGCGCGGGCAAAGGCACCGAGGCAGGCAGTC
CGGGGCTCTGCTGCAGCANGAGGGGAAGGGGCCTGGCTGGNGGCGGAACAGGCCCCGGCG
GCCCGGACCTCCCTTCAGAGGGCAGCGGGGGCCCTGGGAGGTTGCTGGGGGCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               72-250, - strand, RNAz p=0.986006

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               72-250, - strand, RNAz p=0.986006

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               73-209, - strand, RNAmicro p=0.999974

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               73-209, - strand, RNAmicro p=0.999974

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               13-553, gnl|bosTau2|chr19 (26359838-26360383)
               

               
               13-553, gnl|Hg17|chr17 (17530642-17529971)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-553, gnl|bosTau2|chr19 (26359838-26360383)
               

               
               13-553, gnl|Hg17|chr17 (17530642-17529971)

	13-553, gnl\|bosTau2\|chr19 (26359838-26360383)
	13-553, gnl\|Hg17\|chr17 (17530642-17529971)