Non-Coding RNA Search

Mixn-0012k15

Sequence:


               
               TGGGAGCTTCTCTAATAAAACAAAAGTAATGCAGTATTCTTATCTCTTGATTTATCTTTT
TTTGTTTGGTGGTCATGGTATGTCTGAAAACCAAGAAAAGGCCTTGCATTTTGCTCTAAC
CTGATGGATTTACTCCGTCATTCCCTTTTAAAAAGTATCTTAAGAAGAACAGTCTTACAG
CCTTTGTTCTTATAATAACACTCCGTATTTATTATAGAATATTTTGCAAACAAGGTATCG
AAAATAATATTTACAAAGTTTGCTGCCATCCAGTTGACAGTCATGTTGTATTTCTTTCTG
GTCTGATTTTCCTCCCTATTCTTTATACATAATTGAGGCCACATTTTACATAAGATTTTG
TTTCCTGTGTTTTTGCACTTAACAAATGAACAATATGAACTTTCCCCCATGTTATTTATA
ACTGTATAAATATCAATTTTAGTGGTTCCCTAAAGTTCCATTGTGTAGATGTGCAAGAAT
TTTGTTAAAGTTCTCATAATGTTGGAAATTAGAATGTTTCTTATTTTTAAGATTTCAATT
TATTTTTTTGATCACATATGATAATGCAAGGGTCATTGTTATGCTTTGGTTTCATATTCA
AGATTTATAAAAACAGCATTATTGGGTCAAAGAGTATGAATATTTTTAAGAGTTGCATAT
AGCTAAGTGACTTCTTACAACTATATTAAGATATTTTCAAGTAATATTATGATTTAGAAA
ATCTTTACTGATTTGACTTGTGAAAATCACTACTAATTTGCATTTCCTTGATTCTTACGN
AGGTCAATATTTTTCTGTGAATGTGTTGAGCCCAATGATTATTCCCAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGGAGCTTCTCTAATAAAACAAAAGTAATGCAGTATTCTTATCTCTTGATTTATCTTTT
TTTGTTTGGTGGTCATGGTATGTCTGAAAACCAAGAAAAGGCCTTGCATTTTGCTCTAAC
CTGATGGATTTACTCCGTCATTCCCTTTTAAAAAGTATCTTAAGAAGAACAGTCTTACAG
CCTTTGTTCTTATAATAACACTCCGTATTTATTATAGAATATTTTGCAAACAAGGTATCG
AAAATAATATTTACAAAGTTTGCTGCCATCCAGTTGACAGTCATGTTGTATTTCTTTCTG
GTCTGATTTTCCTCCCTATTCTTTATACATAATTGAGGCCACATTTTACATAAGATTTTG
TTTCCTGTGTTTTTGCACTTAACAAATGAACAATATGAACTTTCCCCCATGTTATTTATA
ACTGTATAAATATCAATTTTAGTGGTTCCCTAAAGTTCCATTGTGTAGATGTGCAAGAAT
TTTGTTAAAGTTCTCATAATGTTGGAAATTAGAATGTTTCTTATTTTTAAGATTTCAATT
TATTTTTTTGATCACATATGATAATGCAAGGGTCATTGTTATGCTTTGGTTTCATATTCA
AGATTTATAAAAACAGCATTATTGGGTCAAAGAGTATGAATATTTTTAAGAGTTGCATAT
AGCTAAGTGACTTCTTACAACTATATTAAGATATTTTCAAGTAATATTATGATTTAGAAA
ATCTTTACTGATTTGACTTGTGAAAATCACTACTAATTTGCATTTCCTTGATTCTTACGN
AGGTCAATATTTTTCTGTGAATGTGTTGAGCCCAATGATTATTCCCAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               336-452, + strand, RNAz p=0.804687

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               336-452, + strand, RNAz p=0.804687

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               5-825, gnl|bosTau2|chr24 (6987464-6988290)
               

               
               5-825, gnl|Hg17|chr18 (66121054-66122186)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-825, gnl|bosTau2|chr24 (6987464-6988290)
               

               
               5-825, gnl|Hg17|chr18 (66121054-66122186)

	5-825, gnl\|bosTau2\|chr24 (6987464-6988290)
	5-825, gnl\|Hg17\|chr18 (66121054-66122186)