Non-Coding RNA Search

Mixn-0013c11

Sequence:


               
               GCTAGAGAAGAAACTATTGCTGAGGATAAAACACTTCTAAACAGGTAGAATACTTTAAAA
GAGAGCGTAAATCTCTGGCATTAGAGTTACAGCCGTGTTGATCAGGTAGAGTACAGCCAA
AGCACCCCCTAGGTGTTCAGAATAAATCAGGGTGGTTAGGGATCTTCCACCCATATCATG
TCTAAATGGAAGGGAAATGGGGGAACTTGGAGTAGAAAAGCTGGTAGCCACAGAATCCAG
AAAGCACAAATAGGTGCAGGCTAGTCACCTGAGTTGAATCTGAAAGGTGAAAGTTTGGGC
TACTCTCCTCAAACTGGCTAATGTTAGTGATTATCTGATGAAAGTTGTTGAACCTTTCAA
TTAGAAGGCCTAAAAGTGGATATACATTGCCAAAGAAAGAACCCCATTCTCAGAAAAACT
CCCCAATAAAACAGAAACTTAGGACATGCAAGCGTTGAATCTGTATTCTTACAGAGGGAA
ATCACACCATTTAGCACTCACTACAAAAATATGGTTAAATGGAAGTCACAGGCTACAGCT
TAAAAGCAAGGAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTAGAGAAGAAACTATTGCTGAGGATAAAACACTTCTAAACAGGTAGAATACTTTAAAA
GAGAGCGTAAATCTCTGGCATTAGAGTTACAGCCGTGTTGATCAGGTAGAGTACAGCCAA
AGCACCCCCTAGGTGTTCAGAATAAATCAGGGTGGTTAGGGATCTTCCACCCATATCATG
TCTAAATGGAAGGGAAATGGGGGAACTTGGAGTAGAAAAGCTGGTAGCCACAGAATCCAG
AAAGCACAAATAGGTGCAGGCTAGTCACCTGAGTTGAATCTGAAAGGTGAAAGTTTGGGC
TACTCTCCTCAAACTGGCTAATGTTAGTGATTATCTGATGAAAGTTGTTGAACCTTTCAA
TTAGAAGGCCTAAAAGTGGATATACATTGCCAAAGAAAGAACCCCATTCTCAGAAAAACT
CCCCAATAAAACAGAAACTTAGGACATGCAAGCGTTGAATCTGTATTCTTACAGAGGGAA
ATCACACCATTTAGCACTCACTACAAAAATATGGTTAAATGGAAGTCACAGGCTACAGCT
TAAAAGCAAGGAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               448-561, + strand, RNAz p=0.882134

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               448-561, + strand, RNAz p=0.882134

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               15-561, gnl|bosTau2|chr23 (35102000-35102548)
               

               
               15-561, gnl|Hg17|chr6 (17394173-17393632)
               

               
               15-561, gnl|Mm7|chr13 (45905297-45904757)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-561, gnl|bosTau2|chr23 (35102000-35102548)
               

               
               15-561, gnl|Hg17|chr6 (17394173-17393632)
               

               
               15-561, gnl|Mm7|chr13 (45905297-45904757)

	15-561, gnl\|bosTau2\|chr23 (35102000-35102548)
	15-561, gnl\|Hg17\|chr6 (17394173-17393632)
	15-561, gnl\|Mm7\|chr13 (45905297-45904757)