Mixn-0013o21
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CCTCACTTTCCGGCCACCAACAGCACAGCCGTCTACCGTCTAGAGCTGCTGCTGAAGTGT
CTTGGCAAGCTACAGCTCTTCCGGCCTGCCTTTGAGATCTGCCCCTTTGAGACAGAGCTA
AACATGGACATTGCCGCTGCCCTGAAGAGAGGCAACCGTGAGTGGTACGAGGAGCTCCTG
AACACCCTGAGTCCTCGCGAGCAGCCGGGGCCACAGCGCCTTGCCGGGCTGGTCAAGCTG
GCCGACACTGTCTACGAGGACCTGCAGTCCTGCTACGGCATCTACGCCAGCCTCTTCCAC
AGCATCATCCGGGTCGACATCTTCACCCTCACTTTCCGGCAGCTGGAGCGTCTGGTGGCT
GAAGAGGCGTGGGTGCTGACGGAGGAGCTGGGCCCCAAGATGAGCCTCGAGGTGGCCTCG
GGGCTCTTTGAGCTCTACCTGACCCTGGCAGACATCCAGCGCTTCTGGAGCAGCATCCCA
GGCCGGGACAGCCCGCTCCTGGGCCTGGCTGGCATCA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CCTCACTTTCCGGCCACCAACAGCACAGCCGTCTACCGTCTAGAGCTGCTGCTGAAGTGT
CTTGGCAAGCTACAGCTCTTCCGGCCTGCCTTTGAGATCTGCCCCTTTGAGACAGAGCTA
AACATGGACATTGCCGCTGCCCTGAAGAGAGGCAACCGTGAGTGGTACGAGGAGCTCCTG
AACACCCTGAGTCCTCGCGAGCAGCCGGGGCCACAGCGCCTTGCCGGGCTGGTCAAGCTG
GCCGACACTGTCTACGAGGACCTGCAGTCCTGCTACGGCATCTACGCCAGCCTCTTCCAC
AGCATCATCCGGGTCGACATCTTCACCCTCACTTTCCGGCAGCTGGAGCGTCTGGTGGCT
GAAGAGGCGTGGGTGCTGACGGAGGAGCTGGGCCCCAAGATGAGCCTCGAGGTGGCCTCG
GGGCTCTTTGAGCTCTACCTGACCCTGGCAGACATCCAGCGCTTCTGGAGCAGCATCCCA
GGCCGGGACAGCCCGCTCCTGGGCCTGGCTGGCATCA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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356-478, - strand, RNAmicro p=0.998711 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
356-478, - strand, RNAmicro p=0.998711 |
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201-302, gnl|bosTau2|chr25 (718822-718721) |
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201-302, gnl|Hg17|chr16 (1334599-1334700) |
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201-302, gnl|Mm7|chr17 (23430150-23430049) |
| |
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354-486, gnl|bosTau2|chr25 (718477-718345) |
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354-486, gnl|canFam2|chr6 (42466509-42466353) |
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354-486, gnl|dasNov1|scaffold_83418 (7804-7654) |
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354-486, gnl|fr1|chrUn (164596287-164596439) |
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354-486, gnl|galGal2|chr18 (4461297-4461468) |
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354-486, gnl|hg17|chr16 (1334953-1335109) |
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354-486, gnl|Hg17|chr16 (1334970-1335102) |
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354-486, gnl|loxAfr1|scaffold_30480 (24970-25132) |
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354-486, gnl|mm7|chr17 (23429799-23429643) |
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354-486, gnl|Mm7|chr17 (23429780-23429648) |
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354-486, gnl|monDom2|scaffold_5 (122915579-122915436) |
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354-486, gnl|panTro1|chr18 (1409556-1409712) |
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354-486, gnl|rheMac2|chr20 (1312564-1312720) |
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354-486, gnl|rn3|chr10 (14494246-14494090) |
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354-486, gnl|tetNig1|chr3 (11878390-11878238) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
201-302, gnl|bosTau2|chr25 (718822-718721) |
|
201-302, gnl|Hg17|chr16 (1334599-1334700) |
|
201-302, gnl|Mm7|chr17 (23430150-23430049) |
| |
|
354-486, gnl|bosTau2|chr25 (718477-718345) |
|
354-486, gnl|canFam2|chr6 (42466509-42466353) |
|
354-486, gnl|dasNov1|scaffold_83418 (7804-7654) |
|
354-486, gnl|fr1|chrUn (164596287-164596439) |
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354-486, gnl|galGal2|chr18 (4461297-4461468) |
|
354-486, gnl|hg17|chr16 (1334953-1335109) |
|
354-486, gnl|Hg17|chr16 (1334970-1335102) |
|
354-486, gnl|loxAfr1|scaffold_30480 (24970-25132) |
|
354-486, gnl|mm7|chr17 (23429799-23429643) |
|
354-486, gnl|Mm7|chr17 (23429780-23429648) |
|
354-486, gnl|monDom2|scaffold_5 (122915579-122915436) |
|
354-486, gnl|panTro1|chr18 (1409556-1409712) |
|
354-486, gnl|rheMac2|chr20 (1312564-1312720) |
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354-486, gnl|rn3|chr10 (14494246-14494090) |
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354-486, gnl|tetNig1|chr3 (11878390-11878238) |
