Non-Coding RNA Search

Mixn-0015m07

Sequence:


               
               TACAAAAGATGGGGTAAAAACAGAACTGAGAAAGAAATTGCTCCCTATGTGGGGCAATTG
CCTTTAGTGTGATCTTAAGGATTAGATATTGTCTCCTAAGGAGGAGGGTGTGTCGCTGTA
GATGTCCATCCCTTGGGGGCGTCGTGCTTTAGGTATCAAAGGAAAAATGGTTTTTTGTTT
GAATCTAGAAAATGTAGAATCTGTCACTGGGCTGAAGGAGCAGTGAATGGCTTTTCAAAT
GCAAGAGTATTGCACAAATTCATATTCTTTGCACTTCTTCATTCAGATCCCCCATCCTCA
CCCCCGACACTGCCCATCTCCTTTTATTTCCCTTTGAATTTGTATTAAATTCATTACAAG
TTCTTAAAGGAGAAAGGTTCTCAAGGGTTTAATAGAGATGTTAGATGCTATGAATAAGAA
AAATGGACGGGAAGAGGAATTTACCATTGCTTCTTTGAACTAAATTATAGATCATCTCAA
GGGCTTTTTTCCCCCTTTTGGAGAAAAATATGCTCTTCTCCTCTGGGAAGCTCTAAGTCT
CAAAGGCCTATATTAACTTGATCTTTTGGGAAGGGTGTTTTAATTTTTTCCATAATCACC
ACGCAAATTGATCGTGATAGTTTCTGGAAATTAAAGTGAGTGAACCAACGACCTCATTAA
CTTCAATGCTAGGGAGACCCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACAAAAGATGGGGTAAAAACAGAACTGAGAAAGAAATTGCTCCCTATGTGGGGCAATTG
CCTTTAGTGTGATCTTAAGGATTAGATATTGTCTCCTAAGGAGGAGGGTGTGTCGCTGTA
GATGTCCATCCCTTGGGGGCGTCGTGCTTTAGGTATCAAAGGAAAAATGGTTTTTTGTTT
GAATCTAGAAAATGTAGAATCTGTCACTGGGCTGAAGGAGCAGTGAATGGCTTTTCAAAT
GCAAGAGTATTGCACAAATTCATATTCTTTGCACTTCTTCATTCAGATCCCCCATCCTCA
CCCCCGACACTGCCCATCTCCTTTTATTTCCCTTTGAATTTGTATTAAATTCATTACAAG
TTCTTAAAGGAGAAAGGTTCTCAAGGGTTTAATAGAGATGTTAGATGCTATGAATAAGAA
AAATGGACGGGAAGAGGAATTTACCATTGCTTCTTTGAACTAAATTATAGATCATCTCAA
GGGCTTTTTTCCCCCTTTTGGAGAAAAATATGCTCTTCTCCTCTGGGAAGCTCTAAGTCT
CAAAGGCCTATATTAACTTGATCTTTTGGGAAGGGTGTTTTAATTTTTTCCATAATCACC
ACGCAAATTGATCGTGATAGTTTCTGGAAATTAAAGTGAGTGAACCAACGACCTCATTAA
CTTCAATGCTAGGGAGACCCAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               47-165, + strand, RNAz p=0.648851

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               47-165, + strand, RNAz p=0.648851

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               9-282, gnl|bosTau2|chr21 (5618395-5618126)
               

               
               9-282, gnl|Hg17|chr15 (94559060-94558801)
               

               
               9-282, gnl|Mm7|chr7 (66332988-66333238)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-282, gnl|bosTau2|chr21 (5618395-5618126)
               

               
               9-282, gnl|Hg17|chr15 (94559060-94558801)
               

               
               9-282, gnl|Mm7|chr7 (66332988-66333238)

	9-282, gnl\|bosTau2\|chr21 (5618395-5618126)
	9-282, gnl\|Hg17\|chr15 (94559060-94558801)
	9-282, gnl\|Mm7\|chr7 (66332988-66333238)