Non-Coding RNA Search

Mixn-0016a01

Sequence:


               
               GGGGTGGTGGAGGTGGTGGTGACACAGGTGGATCTTACCTTTACTGGCAACTTGGATGGA
AGCTGTTTGGCCCTGCCTTTCTCTGGCTGCCCTTGCTTCTGTGTGGCACACGGTTTTCTA
AGTGAACCCGTGTCATCCCTGTGTGTGTCTTTCACTGGAATTCTAGACTTTACATCTACA
CATGAAGAAGCAGTAAGGGTTTTGGTTTTCTCCGACTGACTAGCCTGCTTCATTTTACTC
ACGTTAATGTTTGGCATATGATTTGGTGGCAAGAGCTCTTTTGGTGAAGTGGCCTTTATG
GGAAGTTTGGATTTTCGCCTAATCCCTATTGATTCCTTTGCCTTTTGCTGCTCTCCGAGA
ACCTTCTGCTTATCTCTTACACAGTGTCCTTGCAGAACCCCTGTCTTTTTTCCTGGTGAG
CTTCTCACTGGATTAGCTTTCTTTGTGGTACAAGTGGGTGCAGAATGTTCTGTCAGAACT
ACGTGACTTGTAATGTTATCTGTCTGTATGGTGGCAGAATCCAAATTGTTGTTGTTATTA
AAGTTATCTCTTTGGAAATCATGTTTGTCCTGNGGCCTAACGCCCGTGAGGCTATTGGCT
GTGTTTGAAATCACTGTTATAGTTTCATTCTCTAATCCCTGACCACTGGTCATCACAGCT
TCTATCTTATCTGTCACTTCGCCAGGGCCTTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGTGGTGGAGGTGGTGGTGACACAGGTGGATCTTACCTTTACTGGCAACTTGGATGGA
AGCTGTTTGGCCCTGCCTTTCTCTGGCTGCCCTTGCTTCTGTGTGGCACACGGTTTTCTA
AGTGAACCCGTGTCATCCCTGTGTGTGTCTTTCACTGGAATTCTAGACTTTACATCTACA
CATGAAGAAGCAGTAAGGGTTTTGGTTTTCTCCGACTGACTAGCCTGCTTCATTTTACTC
ACGTTAATGTTTGGCATATGATTTGGTGGCAAGAGCTCTTTTGGTGAAGTGGCCTTTATG
GGAAGTTTGGATTTTCGCCTAATCCCTATTGATTCCTTTGCCTTTTGCTGCTCTCCGAGA
ACCTTCTGCTTATCTCTTACACAGTGTCCTTGCAGAACCCCTGTCTTTTTTCCTGGTGAG
CTTCTCACTGGATTAGCTTTCTTTGTGGTACAAGTGGGTGCAGAATGTTCTGTCAGAACT
ACGTGACTTGTAATGTTATCTGTCTGTATGGTGGCAGAATCCAAATTGTTGTTGTTATTA
AAGTTATCTCTTTGGAAATCATGTTTGTCCTGNGGCCTAACGCCCGTGAGGCTATTGGCT
GTGTTTGAAATCACTGTTATAGTTTCATTCTCTAATCCCTGACCACTGGTCATCACAGCT
TCTATCTTATCTGTCACTTCGCCAGGGCCTTCTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               529-694, - strand, RNAz p=0.800167

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               529-694, - strand, RNAz p=0.800167

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-694, gnl|bosTau2|chr28 (12017195-12016501)
               

               
               3-694, gnl|Hg17|chr10 (61498720-61499441)
               

               
               3-694, gnl|Mm7|chr10 (69595667-69594979)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-694, gnl|bosTau2|chr28 (12017195-12016501)
               

               
               3-694, gnl|Hg17|chr10 (61498720-61499441)
               

               
               3-694, gnl|Mm7|chr10 (69595667-69594979)

	3-694, gnl\|bosTau2\|chr28 (12017195-12016501)
	3-694, gnl\|Hg17\|chr10 (61498720-61499441)
	3-694, gnl\|Mm7\|chr10 (69595667-69594979)