Non-Coding RNA Search

Mixn-0016c10

Sequence:


               
               TTCCTCTGCCTCCTTCTACCCTGGGGGAGATTTTGGCACTCATCTCCACGTGGTAGCCAA
CACTGGCATGGTAATAGGCGTGGATCAAACACTTCCTGCCCTGCTTGGCAGGGGGCAGGG
AGAGCCCGAGACCTACAGTCAGGGAGCCTGCCGCATTTTATCCTGAGGACAGGAAAGGAA
CACAGTCCTCAGGGTCTGTGCTGGTCAGAGCTTAGAGGAATTGAATGGCATGCAGCGTCT
CCAGGGAGATACACTCACATGGCCTTGAGTCACCTGGCTCTCCGCCTGCTGAACCTGAGA
GCCCCACAGCATGAGCGAGATGCGACAAGACCCAGAGTCAGGCCCTCGTCCAGAGAAAGG
GCAAGACCAGAAACGCTCTGGGGGAAACTGGCACCAATAGAGATGGAAAGAGGAGTACAA
ATCTCCCCCTGCCAACCCTTCCACATTCATAGCAAGTATCCACATCTTCAAACAAGACAA
GTCTCAATATGCTGCCCTCTTATCCTTCTCTTACTCTCGATCTCTTATATTGGCCCCATG
TTGATATTTTTCCCACCTGCAGATTTACAAAACTTTAATTTCGGCATGCACCTGTTAACT
TGGAAAATGACTTTTCTCCTGGACTCTTGTGTTGTGTAATGAACCAAAGCCAATCAGCAT
ACAGACAAAACAATAAAATGGATTGCAAATCAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCCTCTGCCTCCTTCTACCCTGGGGGAGATTTTGGCACTCATCTCCACGTGGTAGCCAA
CACTGGCATGGTAATAGGCGTGGATCAAACACTTCCTGCCCTGCTTGGCAGGGGGCAGGG
AGAGCCCGAGACCTACAGTCAGGGAGCCTGCCGCATTTTATCCTGAGGACAGGAAAGGAA
CACAGTCCTCAGGGTCTGTGCTGGTCAGAGCTTAGAGGAATTGAATGGCATGCAGCGTCT
CCAGGGAGATACACTCACATGGCCTTGAGTCACCTGGCTCTCCGCCTGCTGAACCTGAGA
GCCCCACAGCATGAGCGAGATGCGACAAGACCCAGAGTCAGGCCCTCGTCCAGAGAAAGG
GCAAGACCAGAAACGCTCTGGGGGAAACTGGCACCAATAGAGATGGAAAGAGGAGTACAA
ATCTCCCCCTGCCAACCCTTCCACATTCATAGCAAGTATCCACATCTTCAAACAAGACAA
GTCTCAATATGCTGCCCTCTTATCCTTCTCTTACTCTCGATCTCTTATATTGGCCCCATG
TTGATATTTTTCCCACCTGCAGATTTACAAAACTTTAATTTCGGCATGCACCTGTTAACT
TGGAAAATGACTTTTCTCCTGGACTCTTGTGTTGTGTAATGAACCAAAGCCAATCAGCAT
ACAGACAAAACAATAAAATGGATTGCAAATCAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               224-343, - strand, RNAz p=0.552576

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               224-343, - strand, RNAz p=0.552576

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               145-692, gnl|bosTau2|chr18 (31264085-31264631)
               

               
               145-692, gnl|Hg17|chr16 (72167330-72166776)
               

               
               145-692, gnl|Mm7|chr8 (106814156-106814668)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               145-692, gnl|bosTau2|chr18 (31264085-31264631)
               

               
               145-692, gnl|Hg17|chr16 (72167330-72166776)
               

               
               145-692, gnl|Mm7|chr8 (106814156-106814668)

	145-692, gnl\|bosTau2\|chr18 (31264085-31264631)
	145-692, gnl\|Hg17\|chr16 (72167330-72166776)
	145-692, gnl\|Mm7\|chr8 (106814156-106814668)