Non-Coding RNA Search

Mixn-0017j19

Sequence:


               
               CGcacacacacatacacacacaggcacacacacacacacacaggcacacacaAGGCAGAA
CAAGGGGTCTGAATTCCAGAATTCTAGCTCTCCCACTACTGGCTGCAGCCCTCAGGCTCT
CCCTTTTCAAGTCCCGTTTTTTCCTGGGATCAGGGATGATTACCAACCTTATCTGGATAG
GGTGGGGCCATACTTACTGTATCATTATCTTTAGTCTCCTGCCTAAGCCATTCCCCTGTC
TTTCCTCACTGTCTAAGGTTCTGGTTCCCTGCCCAAGCCAGGTACAATGTCCCTTACAAC
AGGAAATCTGATAAACACGATGTGATATTGAGAGATGCAGCTGCCCACCTGCTGGGCAAC
TCCAACCTGGGGAGACAAGTCACACCTGAATCACACTGGGGGCGGGCTGCAAAGCACACC
CAGATCTCGCAAGGAAAAAGATTGGCTGAAAGAAAAATCAGCCAGAGGTGGCCCAATATC
TATAAGCTGATTCGGGGCACGGCCATTCTAAGTTACAAAAAATACAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGcacacacacatacacacacaggcacacacacacacacacaggcacacacaAGGCAGAA
CAAGGGGTCTGAATTCCAGAATTCTAGCTCTCCCACTACTGGCTGCAGCCCTCAGGCTCT
CCCTTTTCAAGTCCCGTTTTTTCCTGGGATCAGGGATGATTACCAACCTTATCTGGATAG
GGTGGGGCCATACTTACTGTATCATTATCTTTAGTCTCCTGCCTAAGCCATTCCCCTGTC
TTTCCTCACTGTCTAAGGTTCTGGTTCCCTGCCCAAGCCAGGTACAATGTCCCTTACAAC
AGGAAATCTGATAAACACGATGTGATATTGAGAGATGCAGCTGCCCACCTGCTGGGCAAC
TCCAACCTGGGGAGACAAGTCACACCTGAATCACACTGGGGGCGGGCTGCAAAGCACACC
CAGATCTCGCAAGGAAAAAGATTGGCTGAAAGAAAAATCAGCCAGAGGTGGCCCAATATC
TATAAGCTGATTCGGGGCACGGCCATTCTAAGTTACAAAAAATACAAGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               101-200, + strand, RNAz p=0.648075

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               101-200, + strand, RNAz p=0.648075

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               63-529, gnl|bosTau2|chr7 (5827262-5827731)
               

               
               63-529, gnl|Hg17|chr19 (16541737-16542236)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               63-529, gnl|bosTau2|chr7 (5827262-5827731)
               

               
               63-529, gnl|Hg17|chr19 (16541737-16542236)

	63-529, gnl\|bosTau2\|chr7 (5827262-5827731)
	63-529, gnl\|Hg17\|chr19 (16541737-16542236)