Mixn-0017n21
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CGAAGAGGCTTCAACAGTGTGACAACCTTAGCTTCCCATATCTGAGCACTAAGAGGAGGA
AATTCTCACTCCCGTCGTACAGCCAAGAAAGTTTGACGAAACATCAGGACCGGCTATTGA
TTGTCGAGAGACTGATGAAATGATGGGAGACTTCAGACGTGACTGCTTTAGGTCCTCATT
GGCTTTGAAAACCAGAAGGCTTATATTGTTGCCTGGGAGCGGATCAGGTAACTTCTTGAA
GCTGCTCTGCTTCTGGGTTCACCAGCCATTGATGGAGTATCGTGAGACCGTAGGGTTGGG
AAGAGCGTAAAGATTCTGGCCAGAAATTTCTGGGTGGCACGATGggttaaggacccagca
tggccgcagctgaagctcaggttcgatccctggcctgggaacttccgcatgTCACAGGTG
CAGCCGCCCCCCCCCCCCAAAAAAAATTCCAGCCGGTCAGATTGCAACCAAACTCATCCC
TGACTGCTTGATAATGGCTCTGTTTTTAAAGATCTCCACACAAATTTATTCCACACCTCC
TTTGGTGATTTATTTAGTGATCTTAAGTATCCCGCTCAGGAAATTTGGTCCTCTTCCTAG
ACTGAAATTCCCTGTGCCCGGGTTCCCTCTTGTCCTCAGGGGCCGTGGGAACAGTTGTCA
CCAGCTAATGCCTCATCTCATGACACCTTCACACACTCATCTGAGCTTTTTTCCTCCTTT
ACTCATGAATCTTATTCTCTGGCTCTTTCATCGAATCCGGTTATACGGGCTNCAGCTCAA
CAGGAGGC
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CGAAGAGGCTTCAACAGTGTGACAACCTTAGCTTCCCATATCTGAGCACTAAGAGGAGGA
AATTCTCACTCCCGTCGTACAGCCAAGAAAGTTTGACGAAACATCAGGACCGGCTATTGA
TTGTCGAGAGACTGATGAAATGATGGGAGACTTCAGACGTGACTGCTTTAGGTCCTCATT
GGCTTTGAAAACCAGAAGGCTTATATTGTTGCCTGGGAGCGGATCAGGTAACTTCTTGAA
GCTGCTCTGCTTCTGGGTTCACCAGCCATTGATGGAGTATCGTGAGACCGTAGGGTTGGG
AAGAGCGTAAAGATTCTGGCCAGAAATTTCTGGGTGGCACGATGggttaaggacccagca
tggccgcagctgaagctcaggttcgatccctggcctgggaacttccgcatgTCACAGGTG
CAGCCGCCCCCCCCCCCCAAAAAAAATTCCAGCCGGTCAGATTGCAACCAAACTCATCCC
TGACTGCTTGATAATGGCTCTGTTTTTAAAGATCTCCACACAAATTTATTCCACACCTCC
TTTGGTGATTTATTTAGTGATCTTAAGTATCCCGCTCAGGAAATTTGGTCCTCTTCCTAG
ACTGAAATTCCCTGTGCCCGGGTTCCCTCTTGTCCTCAGGGGCCGTGGGAACAGTTGTCA
CCAGCTAATGCCTCATCTCATGACACCTTCACACACTCATCTGAGCTTTTTTCCTCCTTT
ACTCATGAATCTTATTCTCTGGCTCTTTCATCGAATCCGGTTATACGGGCTNCAGCTCAA
CAGGAGGC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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481-782, gnl|bosTau2|chr19 (12665470-12665173) |
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481-782, gnl|canFam2|chr9 (43757055-43756773) |
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481-782, gnl|echTel1|scaffold_324462 (121526-121261) |
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481-782, gnl|hg17|chr17 (27920887-27921198) |
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481-782, gnl|Hg17|chr17 (27921216-27920911) |
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481-782, gnl|loxAfr1|scaffold_10631 (5227-4921) |
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481-782, gnl|mm7|chr11 (80614930-80615219) |
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481-782, gnl|Mm7|chr11 (80615237-80614950) |
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481-782, gnl|oryCun1|scaffold_204815 (103494-103199) |
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481-782, gnl|panTro1|chr19 (31442322-31442633) |
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481-782, gnl|rheMac2|chr16 (27900023-27900333) |
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481-782, gnl|rn3|chr10 (68784885-68785172) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
481-782, gnl|bosTau2|chr19 (12665470-12665173) |
|
481-782, gnl|canFam2|chr9 (43757055-43756773) |
|
481-782, gnl|echTel1|scaffold_324462 (121526-121261) |
|
481-782, gnl|hg17|chr17 (27920887-27921198) |
|
481-782, gnl|Hg17|chr17 (27921216-27920911) |
|
481-782, gnl|loxAfr1|scaffold_10631 (5227-4921) |
|
481-782, gnl|mm7|chr11 (80614930-80615219) |
|
481-782, gnl|Mm7|chr11 (80615237-80614950) |
|
481-782, gnl|oryCun1|scaffold_204815 (103494-103199) |
|
481-782, gnl|panTro1|chr19 (31442322-31442633) |
|
481-782, gnl|rheMac2|chr16 (27900023-27900333) |
|
481-782, gnl|rn3|chr10 (68784885-68785172) |
