Mixn-0018d22
|
GTGGAAAAAAAAGTCGGATGCTGGCCTCTGGAAATCAGCCAGATCAAGATATTGCGCATT
TCTTCCAGCAGATCCAGGAGCTCAATTTGGAAATGGAAGACCAGCAGGAGAACCTGGATA
CTCTTGAGCACCTGGTCACTGACCTGAGCTCCTGCGGCTTTGCACTGGACCTGTCCCAGC
ACCAGAACAGGGTACAGAACCTCAAAAAGGACTTCACAGAGCTACAGAAGACAGTTAAAG
AAAGAGAGGAAGATGCATCGTCTTGCCAGGAGCAGTTAGATGAATTCCGGAAGCTGGTTA
GGACTTTTCAGAAATGGCTGAAGGAAACTGAAGGGACCATTCCGCCTACGGAGACTTTCA
TGAGTACTAAAGAGCTGGAAAAGCAGATTGAACACCTGAAGGGTCTTCTAGATGAATGGG
CAAGTAAGGGAACTTTGGTAGAAGAAATCAATTGCAAAGGCACTTCTTTAGAAAATCTCA
TCATGGACATCACAGCACCTGATTCCCAAGCAAAGACAGGTTCCATACTGCCCCCTGTAG
GAAGCTCTGTAGGCAGTGTAAACGGATACCACACCTGCAAAGATCTGACGGAGATCCAGT
GTGACATGTCAGATGTAAACCTGAAATATGAGAAACTCGGGGAAGTGCTACGGGAACGCC
AGGAAAGCCTTCAGGCTGTCCTCAGCAGAGTGCAGGAAGTTCAGAAGGAGGCAAGCTCCG
TGCTCCAGTGGCTGGGATCAAAAGAGGAAGTCCTGAAAGGCTTGGATGCCTCTTCATCTC
CAACCAAGACAGAGACAGTGAGAGCCCAAGCTGAGTCTAACAGGNCCTTCCTGGCTGAAC
TG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GTGGAAAAAAAAGTCGGATGCTGGCCTCTGGAAATCAGCCAGATCAAGATATTGCGCATT
TCTTCCAGCAGATCCAGGAGCTCAATTTGGAAATGGAAGACCAGCAGGAGAACCTGGATA
CTCTTGAGCACCTGGTCACTGACCTGAGCTCCTGCGGCTTTGCACTGGACCTGTCCCAGC
ACCAGAACAGGGTACAGAACCTCAAAAAGGACTTCACAGAGCTACAGAAGACAGTTAAAG
AAAGAGAGGAAGATGCATCGTCTTGCCAGGAGCAGTTAGATGAATTCCGGAAGCTGGTTA
GGACTTTTCAGAAATGGCTGAAGGAAACTGAAGGGACCATTCCGCCTACGGAGACTTTCA
TGAGTACTAAAGAGCTGGAAAAGCAGATTGAACACCTGAAGGGTCTTCTAGATGAATGGG
CAAGTAAGGGAACTTTGGTAGAAGAAATCAATTGCAAAGGCACTTCTTTAGAAAATCTCA
TCATGGACATCACAGCACCTGATTCCCAAGCAAAGACAGGTTCCATACTGCCCCCTGTAG
GAAGCTCTGTAGGCAGTGTAAACGGATACCACACCTGCAAAGATCTGACGGAGATCCAGT
GTGACATGTCAGATGTAAACCTGAAATATGAGAAACTCGGGGAAGTGCTACGGGAACGCC
AGGAAAGCCTTCAGGCTGTCCTCAGCAGAGTGCAGGAAGTTCAGAAGGAGGCAAGCTCCG
TGCTCCAGTGGCTGGGATCAAAAGAGGAAGTCCTGAAAGGCTTGGATGCCTCTTCATCTC
CAACCAAGACAGAGACAGTGAGAGCCCAAGCTGAGTCTAACAGGNCCTTCCTGGCTGAAC
TG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
75-244, gnl|bosTau2|chr3 (73234662-73234493) |
|
75-244, gnl|canFam2|chr15 (6466381-6466159) |
|
75-244, gnl|dasNov1|scaffold_1092 (53640-53417) |
|
75-244, gnl|echTel1|scaffold_320575 (39998-39769) |
|
75-244, gnl|fr1|chrUn (83378030-83377794) |
|
75-244, gnl|galGal2|chr23 (4816364-4816557) |
|
75-244, gnl|hg17|chr1 (39502868-39503090) |
|
75-244, gnl|Hg17|chr1 (39502910-39503079) |
|
75-244, gnl|mm7|chr4 (122894817-122894595) |
|
75-244, gnl|Mm7|chr4 (122894773-122894604) |
|
75-244, gnl|monDom2|scaffold_43 (9867329-9867106) |
|
75-244, gnl|oryCun1|scaffold_172668 (36927-37152) |
|
75-244, gnl|panTro1|chr1 (40383302-40383524) |
|
75-244, gnl|rheMac2|chr1 (42239621-42239843) |
|
75-244, gnl|rn3|chr5 (142762254-142762034) |
|
75-244, gnl|xenTro1|scaffold_1043 (144847-144619) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
75-244, gnl|bosTau2|chr3 (73234662-73234493) |
|
75-244, gnl|canFam2|chr15 (6466381-6466159) |
|
75-244, gnl|dasNov1|scaffold_1092 (53640-53417) |
|
75-244, gnl|echTel1|scaffold_320575 (39998-39769) |
|
75-244, gnl|fr1|chrUn (83378030-83377794) |
|
75-244, gnl|galGal2|chr23 (4816364-4816557) |
|
75-244, gnl|hg17|chr1 (39502868-39503090) |
|
75-244, gnl|Hg17|chr1 (39502910-39503079) |
|
75-244, gnl|mm7|chr4 (122894817-122894595) |
|
75-244, gnl|Mm7|chr4 (122894773-122894604) |
|
75-244, gnl|monDom2|scaffold_43 (9867329-9867106) |
|
75-244, gnl|oryCun1|scaffold_172668 (36927-37152) |
|
75-244, gnl|panTro1|chr1 (40383302-40383524) |
|
75-244, gnl|rheMac2|chr1 (42239621-42239843) |
|
75-244, gnl|rn3|chr5 (142762254-142762034) |
|
75-244, gnl|xenTro1|scaffold_1043 (144847-144619) |
