Non-Coding RNA Search

Mixn-0018o19

Sequence:


               
               CCTGTGCCCCTGGAGGCACCTCTCAGTCATCTCGGCCTCGCTGAACCGTGAGTCATGGGT
GCGAAGCTTTCCGCCAAGAACAAGTTTTAGGATTCTCTCTACAGGCTCTGTGCCCTTCCC
AGACCTGGGAGTCCTGATCCTGCTCTGCTTCAGCATTTCCTAAGGGCTCAAGACCCCCAG
ACCCTCCTCCAGCCTAGAAGCGCATGTGCTGCCACCAGAGAGTCCCCATCTGGACGCGCA
AAGAAGCTGGAGTTCTGGCTCAGCCGCTCCAGCCGGAGAACTTGGGGTTCCACCAGCATT
TTCCTCCTGAGGTTCAGCTGGCCCCTGGCTTCTCCCAACCCTGGCACCTCCAGAGCCCAG
AGTCCCACCTTACCTTACCGACCACCACCTCCACCTTGGTGCCAGCACAGGGTCCTGTCC
AAACCCCAGCATCCACTCCTCCACTCCAAGCACCCATCCTCCCAGACGCACCGTCCACAG
GGACTCCAGTCCCCAGTGCGTGGTCCTATTCCCTCTGCCCCAACGCAAAAGTCCTTGCTC
TGGGAGGCTCTCCTGCCAACCTTCACCTGGGATGTGGGGCTAGAAGTCCCCACATCTCCC
TGCCTTTCCCTCCATCTCCCCGAGAGCAGTTCCTTACCTGGGTAACCAGCGGGCACAATG
CCTCTGCACCTGCTCTGCCCCCGACCTTGGGGAGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTGTGCCCCTGGAGGCACCTCTCAGTCATCTCGGCCTCGCTGAACCGTGAGTCATGGGT
GCGAAGCTTTCCGCCAAGAACAAGTTTTAGGATTCTCTCTACAGGCTCTGTGCCCTTCCC
AGACCTGGGAGTCCTGATCCTGCTCTGCTTCAGCATTTCCTAAGGGCTCAAGACCCCCAG
ACCCTCCTCCAGCCTAGAAGCGCATGTGCTGCCACCAGAGAGTCCCCATCTGGACGCGCA
AAGAAGCTGGAGTTCTGGCTCAGCCGCTCCAGCCGGAGAACTTGGGGTTCCACCAGCATT
TTCCTCCTGAGGTTCAGCTGGCCCCTGGCTTCTCCCAACCCTGGCACCTCCAGAGCCCAG
AGTCCCACCTTACCTTACCGACCACCACCTCCACCTTGGTGCCAGCACAGGGTCCTGTCC
AAACCCCAGCATCCACTCCTCCACTCCAAGCACCCATCCTCCCAGACGCACCGTCCACAG
GGACTCCAGTCCCCAGTGCGTGGTCCTATTCCCTCTGCCCCAACGCAAAAGTCCTTGCTC
TGGGAGGCTCTCCTGCCAACCTTCACCTGGGATGTGGGGCTAGAAGTCCCCACATCTCCC
TGCCTTTCCCTCCATCTCCCCGAGAGCAGTTCCTTACCTGGGTAACCAGCGGGCACAATG
CCTCTGCACCTGCTCTGCCCCCGACCTTGGGGAGGGG

Predicted RNA structure(s): 2 entry(ies)

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Predicted RNA structure(s): 2 entry(ies)

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               246-360, - strand, RNAz p=0.551478
               

               
               596-697, - strand, RNAz p=0.535434

Predicted RNA structure(s): 2 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               246-360, - strand, RNAz p=0.551478
               

               
               596-697, - strand, RNAz p=0.535434

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_019105, -

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_019105, -

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-697, gnl|bosTau2|chr23 (23752824-23752109)
               

               
               1-697, gnl|Hg17|chr6 (32184202-32184995)
               

               
               1-697, gnl|Mm7|chr17 (32746825-32746116)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-697, gnl|bosTau2|chr23 (23752824-23752109)
               

               
               1-697, gnl|Hg17|chr6 (32184202-32184995)
               

               
               1-697, gnl|Mm7|chr17 (32746825-32746116)

	246-360, - strand, RNAz p=0.551478
	596-697, - strand, RNAz p=0.535434

	1-697, gnl\|bosTau2\|chr23 (23752824-23752109)
	1-697, gnl\|Hg17\|chr6 (32184202-32184995)
	1-697, gnl\|Mm7\|chr17 (32746825-32746116)