Non-Coding RNA Search

Mixn-0019f06

Sequence:


               
               GCGGCGACTGGTTCTCATACTGCCCATCGCTGGCTGCCCGCCTCCGGAGAGGTGCTGGGG
GCTCGGCAGGCTGCTTCTCCCGAGCCTGCACTCCTGCCACCCGGTGGGCCACCAGCCCCT
CCAGATTCAATGGCTCCTCCTCCGGAGTTCGAGATGGGTCTAGAGTCATCTCCTTTGGTG
GAAGCCGAGGCTGAGCGGTGAGGCCAGGGAGAGAGGCCGGGGGCTGCTGAGGCCCTGAAG
AGCTCTGGGTAGTTGGAAGGAAGGCAGAGGAGGAGGAAGAAGCTGGGCTCTTTGGACGGT
AACTCTGGTTGGGCCCAGACGGACATGGCTGATAATCGTAAGGTGAGTAAGACCTGCCAG
AAGGGACGGACTCCAGGGAGGCCCGGGGTATGGGCTCAGGGGTCGCCAAGGAATTCCCGC
TGGGGATGTAGCCAGATCTGGACTGGGTCAGTGGGTGAGACTGGTAGGAGGAGCCAGAGA
GAGGCTGGGAGGAGAGTGGGGAAGCCCCCGGCCAGGCCCCAGGGACACTCTGGGACTTGT
GCAGTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCGACTGGTTCTCATACTGCCCATCGCTGGCTGCCCGCCTCCGGAGAGGTGCTGGGG
GCTCGGCAGGCTGCTTCTCCCGAGCCTGCACTCCTGCCACCCGGTGGGCCACCAGCCCCT
CCAGATTCAATGGCTCCTCCTCCGGAGTTCGAGATGGGTCTAGAGTCATCTCCTTTGGTG
GAAGCCGAGGCTGAGCGGTGAGGCCAGGGAGAGAGGCCGGGGGCTGCTGAGGCCCTGAAG
AGCTCTGGGTAGTTGGAAGGAAGGCAGAGGAGGAGGAAGAAGCTGGGCTCTTTGGACGGT
AACTCTGGTTGGGCCCAGACGGACATGGCTGATAATCGTAAGGTGAGTAAGACCTGCCAG
AAGGGACGGACTCCAGGGAGGCCCGGGGTATGGGCTCAGGGGTCGCCAAGGAATTCCCGC
TGGGGATGTAGCCAGATCTGGACTGGGTCAGTGGGTGAGACTGGTAGGAGGAGCCAGAGA
GAGGCTGGGAGGAGAGTGGGGAAGCCCCCGGCCAGGCCCCAGGGACACTCTGGGACTTGT
GCAGTGGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               292-548, + strand, RNAz p=0.993905

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               292-548, + strand, RNAz p=0.993905

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               93-548, gnl|bosTau2|chr2 (63397805-63398260)
               

               
               93-548, gnl|Hg17|chr2 (218537738-218538193)
               

               
               93-548, gnl|Mm7|chr1 (74194670-74195092)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               93-548, gnl|bosTau2|chr2 (63397805-63398260)
               

               
               93-548, gnl|Hg17|chr2 (218537738-218538193)
               

               
               93-548, gnl|Mm7|chr1 (74194670-74195092)

	93-548, gnl\|bosTau2\|chr2 (63397805-63398260)
	93-548, gnl\|Hg17\|chr2 (218537738-218538193)
	93-548, gnl\|Mm7\|chr1 (74194670-74195092)