Non-Coding RNA Search

Mixn-0019f10

Sequence:


               
               CCCGGCCTGACCCAGGACCCCCGCCCCCACCCCCGGCCCTTGTCTCGGATTGTCTTCCAT
TTTTGAGCATGACTGGGAGGTGGGGCGCGGAAACCCAGACGCGGCGGCTGATGATGTGAG
CGATGGCCTTTTCTCTTGCAGCCGCGAGGCGACTGGACGGGGAGGATGCGAGCCTGGAGC
TGGACAACAGGAAGCAGAAGACTAGCTGGCTGATTTCCAAGGGGGACGCAGACACGAGGA
CTAACTCTCCAGACCTGGACAGCCAGGCGTTGTCCCACAGCAGCGGGACCGACAGAGGCC
CCCTCCAAACGATGCATGCGGACGACCTGTACTCACAGTACAAGATCTATCCTTATGACG
CCCTCATCGTGACAAACCGGATCCGCGTGAAGCTGCCCAAGGACGTGGACCGGACCAGAC
TGGAGAGACACTTGTCGCCGGAGGAGTTCCAGGAAGTGTTTGGGATGAGCATGGAAGAGT
TTGACCGCCTGGCGCTCTGGAAGAGGAACGACCTCAAGAAGAAAGCCCTGCTGTTTTGAC
GCCGCTGGCGCCTGGCCGCGGGCTCCCCTGCGGGAAGCACCAGACCCCTCCTGCTGCACC
TGCCTCTGGCTTCTCTGTGTCTGCGACGGGCAGAGGGCGGGCAGGGGCGCCTGAGAAGGG
CCCGGCGGGGGGCTGGGGCGGGAGGAGTCCACAGCAGGTGCAGCCCCGTTTCTGCCAGCC
CTGCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCGGCCTGACCCAGGACCCCCGCCCCCACCCCCGGCCCTTGTCTCGGATTGTCTTCCAT
TTTTGAGCATGACTGGGAGGTGGGGCGCGGAAACCCAGACGCGGCGGCTGATGATGTGAG
CGATGGCCTTTTCTCTTGCAGCCGCGAGGCGACTGGACGGGGAGGATGCGAGCCTGGAGC
TGGACAACAGGAAGCAGAAGACTAGCTGGCTGATTTCCAAGGGGGACGCAGACACGAGGA
CTAACTCTCCAGACCTGGACAGCCAGGCGTTGTCCCACAGCAGCGGGACCGACAGAGGCC
CCCTCCAAACGATGCATGCGGACGACCTGTACTCACAGTACAAGATCTATCCTTATGACG
CCCTCATCGTGACAAACCGGATCCGCGTGAAGCTGCCCAAGGACGTGGACCGGACCAGAC
TGGAGAGACACTTGTCGCCGGAGGAGTTCCAGGAAGTGTTTGGGATGAGCATGGAAGAGT
TTGACCGCCTGGCGCTCTGGAAGAGGAACGACCTCAAGAAGAAAGCCCTGCTGTTTTGAC
GCCGCTGGCGCCTGGCCGCGGGCTCCCCTGCGGGAAGCACCAGACCCCTCCTGCTGCACC
TGCCTCTGGCTTCTCTGTGTCTGCGACGGGCAGAGGGCGGGCAGGGGCGCCTGAGAAGGG
CCCGGCGGGGGGCTGGGGCGGGAGGAGTCCACAGCAGGTGCAGCCCCGTTTCTGCCAGCC
CTGCCC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|47216804|emb|CAG10126.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|47216804|emb|CAG10126.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               193-336, gnl|bosTau2|chr6 (68528207-68528064)
               

               
               193-336, gnl|Hg17|chr4 (8128000-8127857)
               

               
               193-336, gnl|Mm7|chr5 (34920215-34920358)
               


               
               421-714, gnl|bosTau2|chr6 (68584532-68584225)
               

               
               421-714, gnl|Hg17|chr4 (8086906-8086638)
               

               
               421-714, gnl|Mm7|chr5 (34945695-34945991)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               193-336, gnl|bosTau2|chr6 (68528207-68528064)
               

               
               193-336, gnl|Hg17|chr4 (8128000-8127857)
               

               
               193-336, gnl|Mm7|chr5 (34920215-34920358)
               


               
               421-714, gnl|bosTau2|chr6 (68584532-68584225)
               

               
               421-714, gnl|Hg17|chr4 (8086906-8086638)
               

               
               421-714, gnl|Mm7|chr5 (34945695-34945991)

	193-336, gnl\|bosTau2\|chr6 (68528207-68528064)
	193-336, gnl\|Hg17\|chr4 (8128000-8127857)
	193-336, gnl\|Mm7\|chr5 (34920215-34920358)

	421-714, gnl\|bosTau2\|chr6 (68584532-68584225)
	421-714, gnl\|Hg17\|chr4 (8086906-8086638)
	421-714, gnl\|Mm7\|chr5 (34945695-34945991)