Mixn-0021o11
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TAGATCCCAGCCATGAGGGCACAGCAGAGGGCATGGAGAACATGGCAGATGCTGTCACCC ATGCCCGTTTTGTGGGCACAGATCCTGCCAGCGATGAGGTTGTCCTGATGAAAATCCTTC AGGTGCTGCGGACTCTGTTGCTGACCCCAGTGGGTGCCCACCTAACCAATGAATCTGTCT GTGAGATTATGCAGTCTTGCTTCCGGATCTGCTTTGAAATGAGGCTCAGTGAGTTATTGA GAAAATCCGCAGAGCACACTCTCGTAGACATGGTGCAGCTGCTCTTCACAAGGTTACCTC AGTTTAAAGAAGAACCCAAGAACTATGTGGGGACCAACATGAAGAAGCTGAAAATGAGAG CAGGAGGCATGAGTGATTCATCCAAGTGGAAGAAACAGAAGAGGTCCCCCCGGCCCCCAC GCCATATGACCAAAGTCACACCAGGTTCAGAGCTGCCCACCCCCAATGGAACCACCTTAT CCTCTAACCTCACGGGTGGCATGCCCTTCATTGATGTACCCACTCCCATCTCCTCTGCAA GTTCAGAAGCTGCCTCAGCTGTGGTCAGCCCCTCTACAGACAGTGGCCTGGAGTTCTCTT CCCAGACCACCTCCAAAGAGGACCTCACTGACCTGGAGCAACCTGGCTCTCCAGGGTACA GCACAGTTGCAGAGCCTGGCAGCAGTGAGCTGGGGGTTCCTGAGCAACCTGACCCCCAGG AGGGAACCCATGTGGAAAAGACCAATCAGCTTCTGTGGAATCCATCCCTGAAGTGTTAGA AGAGTGCACATCCCCTACTGACCACTCTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TAGATCCCAGCCATGAGGGCACAGCAGAGGGCATGGAGAACATGGCAGATGCTGTCACCC ATGCCCGTTTTGTGGGCACAGATCCTGCCAGCGATGAGGTTGTCCTGATGAAAATCCTTC AGGTGCTGCGGACTCTGTTGCTGACCCCAGTGGGTGCCCACCTAACCAATGAATCTGTCT GTGAGATTATGCAGTCTTGCTTCCGGATCTGCTTTGAAATGAGGCTCAGTGAGTTATTGA GAAAATCCGCAGAGCACACTCTCGTAGACATGGTGCAGCTGCTCTTCACAAGGTTACCTC AGTTTAAAGAAGAACCCAAGAACTATGTGGGGACCAACATGAAGAAGCTGAAAATGAGAG CAGGAGGCATGAGTGATTCATCCAAGTGGAAGAAACAGAAGAGGTCCCCCCGGCCCCCAC GCCATATGACCAAAGTCACACCAGGTTCAGAGCTGCCCACCCCCAATGGAACCACCTTAT CCTCTAACCTCACGGGTGGCATGCCCTTCATTGATGTACCCACTCCCATCTCCTCTGCAA GTTCAGAAGCTGCCTCAGCTGTGGTCAGCCCCTCTACAGACAGTGGCCTGGAGTTCTCTT CCCAGACCACCTCCAAAGAGGACCTCACTGACCTGGAGCAACCTGGCTCTCCAGGGTACA GCACAGTTGCAGAGCCTGGCAGCAGTGAGCTGGGGGTTCCTGAGCAACCTGACCCCCAGG AGGGAACCCATGTGGAAAAGACCAATCAGCTTCTGTGGAATCCATCCCTGAAGTGTTAGA AGAGTGCACATCCCCTACTGACCACTCTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 495-720, - strand, RNAz p=0.994148 | |
| 523-720, - strand, RNAz p=0.894865 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 495-720, - strand, RNAz p=0.994148 | |
| 523-720, - strand, RNAz p=0.894865 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 2-124, gnl|bosTau2|chr26 (14162563-14162441) | |
| 2-124, gnl|canFam2|chr28 (17868367-17868520) | |
| 2-124, gnl|danRer3|chr13 (4886043-4886168) | |
| 2-124, gnl|dasNov1|scaffold_40902 (16586-16434) | |
| 2-124, gnl|echTel1|scaffold_316526 (110822-110975) | |
| 2-124, gnl|fr1|chrUn (325652911-325653051) | |
| 2-124, gnl|galGal2|chr6 (16116904-16117052) | |
| 2-124, gnl|hg17|chr10 (104100981-104101133) | |
| 2-124, gnl|Hg17|chr10 (104101001-104101123) | |
| 2-124, gnl|loxAfr1|scaffold_90204 (4093-4245) | |
| 2-124, gnl|mm7|chr19 (46148728-46148878) | |
| 2-124, gnl|Mm7|chr19 (46148746-46148868) | |
| 2-124, gnl|monDom2|scaffold_14 (60990130-60989980) | |
| 2-124, gnl|oryCun1|scaffold_173060 (16319-16471) | |
| 2-124, gnl|panTro1|chr8 (105858675-105858827) | |
| 2-124, gnl|rheMac2|chr9 (102009551-102009703) | |
| 2-124, gnl|rn3|chr1 (251729399-251729550) | |
| 2-124, gnl|tetNig1|chrUn_random (102128228-102128088) | |
| 2-124, gnl|xenTro1|scaffold_507 (749727-749579) | |
| 495-720, gnl|bosTau2|chr26 (14155778-14155553) | |
| 495-720, gnl|canFam2|chr28 (17875281-17875473) | |
| 495-720, gnl|danRer3|chr13 (4910961-4911131) | |
| 495-720, gnl|dasNov1|scaffold_40902 (9705-9517) | |
| 495-720, gnl|echTel1|scaffold_316526 (117853-118045) | |
| 495-720, gnl|fr1|chrUn (310471030-310470889) | |
| 495-720, gnl|galGal2|chr6 (16128258-16128460) | |
| 495-720, gnl|hg17|chr10 (104108238-104108430) | |
| 495-720, gnl|Hg17|chr10 (104108252-104108477) | |
| 495-720, gnl|loxAfr1|scaffold_59282 (6485-6677) | |
| 495-720, gnl|mm7|chr19 (46156193-46156384) | |
| 495-720, gnl|Mm7|chr19 (46156206-46156431) | |
| 495-720, gnl|monDom2|scaffold_14 (60981409-60981209) | |
| 495-720, gnl|panTro1|chr8 (105866152-105866344) | |
| 495-720, gnl|rheMac2|chr9 (102016814-102017006) | |
| 495-720, gnl|rn3|chr1 (251736825-251737015) | |
| 495-720, gnl|tetNig1|chrUn_random (102124880-102124707) | |
| 495-720, gnl|xenTro1|scaffold_507 (735974-735767) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-124, gnl|bosTau2|chr26 (14162563-14162441) | |
| 2-124, gnl|canFam2|chr28 (17868367-17868520) | |
| 2-124, gnl|danRer3|chr13 (4886043-4886168) | |
| 2-124, gnl|dasNov1|scaffold_40902 (16586-16434) | |
| 2-124, gnl|echTel1|scaffold_316526 (110822-110975) | |
| 2-124, gnl|fr1|chrUn (325652911-325653051) | |
| 2-124, gnl|galGal2|chr6 (16116904-16117052) | |
| 2-124, gnl|hg17|chr10 (104100981-104101133) | |
| 2-124, gnl|Hg17|chr10 (104101001-104101123) | |
| 2-124, gnl|loxAfr1|scaffold_90204 (4093-4245) | |
| 2-124, gnl|mm7|chr19 (46148728-46148878) | |
| 2-124, gnl|Mm7|chr19 (46148746-46148868) | |
| 2-124, gnl|monDom2|scaffold_14 (60990130-60989980) | |
| 2-124, gnl|oryCun1|scaffold_173060 (16319-16471) | |
| 2-124, gnl|panTro1|chr8 (105858675-105858827) | |
| 2-124, gnl|rheMac2|chr9 (102009551-102009703) | |
| 2-124, gnl|rn3|chr1 (251729399-251729550) | |
| 2-124, gnl|tetNig1|chrUn_random (102128228-102128088) | |
| 2-124, gnl|xenTro1|scaffold_507 (749727-749579) | |
| 495-720, gnl|bosTau2|chr26 (14155778-14155553) | |
| 495-720, gnl|canFam2|chr28 (17875281-17875473) | |
| 495-720, gnl|danRer3|chr13 (4910961-4911131) | |
| 495-720, gnl|dasNov1|scaffold_40902 (9705-9517) | |
| 495-720, gnl|echTel1|scaffold_316526 (117853-118045) | |
| 495-720, gnl|fr1|chrUn (310471030-310470889) | |
| 495-720, gnl|galGal2|chr6 (16128258-16128460) | |
| 495-720, gnl|hg17|chr10 (104108238-104108430) | |
| 495-720, gnl|Hg17|chr10 (104108252-104108477) | |
| 495-720, gnl|loxAfr1|scaffold_59282 (6485-6677) | |
| 495-720, gnl|mm7|chr19 (46156193-46156384) | |
| 495-720, gnl|Mm7|chr19 (46156206-46156431) | |
| 495-720, gnl|monDom2|scaffold_14 (60981409-60981209) | |
| 495-720, gnl|panTro1|chr8 (105866152-105866344) | |
| 495-720, gnl|rheMac2|chr9 (102016814-102017006) | |
| 495-720, gnl|rn3|chr1 (251736825-251737015) | |
| 495-720, gnl|tetNig1|chrUn_random (102124880-102124707) | |
| 495-720, gnl|xenTro1|scaffold_507 (735974-735767) |