Non-Coding RNA Search

Mixn-0022d14

Sequence:


               
               GTTCTCCCTACAGTCCCACGCTCCCCCCAACTCCTCTGGTCTGTCTGCCCCCCTCCCCTC
CCCCTCTCTCACACACACGCAACCCAACCCCAGCAAAAGGCATTGCACAGAGGATACCGT
TTCCCAGTGGAGAGGTCACCGTGGGACCAGGTGGTCTGCAAGGCAGTTCCTGAGCTTGCT
CTTGGGACGGCCTTTTGGGGGCAAAGCACTTTCGAGCCAAAAGCAACCCTCACTTGGATG
CAGACCCCCTGGGGAGGGCTCGTCTCCATGACTGTCAGGCCCTGCCTACCCCTGGAGAGT
GGCAGGCCAGGGGGCTGCACCCCTTGGATGCCCTGGTGGCCGTGGTGGTTGCCTGGCCCA
GGGGGGCTTCAGAAAGGTGACCTTGCTCTGGTCAAGGCCCGTCGACGGGCCAGGCTATGG
CCTGTAGATCTTAATGACGTCCTTGATGGGCCGCCGGCAGATGGGGCAGCAGGCCCGGGC
CTGCCTCTTGAGCCGCAGGCCGCAGCCGTGGCACAGGCACATGTGTCCACACGTGTAGAT
GACCGTGTCCACCTCGCCGTCGAAGCACACCGTGCACTCGCCGTTCTTGCTGCCAGTCAG
CTCCGGTGGGGAGAACACGGGGGACACCGGGGGGCTCAGCGGGGAGCTGGGGGCCGTCAC
CAGGGATGATTCAGACGCTGAGGAGGACTGGTTGACGCTGAAGGCCATGTCAGAATCGCT
ATCGTCCTGGGAGCCGCTGAGAGACCCTGATGGNNGAGTGGTCGCANGGCTGGACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCTCCCTACAGTCCCACGCTCCCCCCAACTCCTCTGGTCTGTCTGCCCCCCTCCCCTC
CCCCTCTCTCACACACACGCAACCCAACCCCAGCAAAAGGCATTGCACAGAGGATACCGT
TTCCCAGTGGAGAGGTCACCGTGGGACCAGGTGGTCTGCAAGGCAGTTCCTGAGCTTGCT
CTTGGGACGGCCTTTTGGGGGCAAAGCACTTTCGAGCCAAAAGCAACCCTCACTTGGATG
CAGACCCCCTGGGGAGGGCTCGTCTCCATGACTGTCAGGCCCTGCCTACCCCTGGAGAGT
GGCAGGCCAGGGGGCTGCACCCCTTGGATGCCCTGGTGGCCGTGGTGGTTGCCTGGCCCA
GGGGGGCTTCAGAAAGGTGACCTTGCTCTGGTCAAGGCCCGTCGACGGGCCAGGCTATGG
CCTGTAGATCTTAATGACGTCCTTGATGGGCCGCCGGCAGATGGGGCAGCAGGCCCGGGC
CTGCCTCTTGAGCCGCAGGCCGCAGCCGTGGCACAGGCACATGTGTCCACACGTGTAGAT
GACCGTGTCCACCTCGCCGTCGAAGCACACCGTGCACTCGCCGTTCTTGCTGCCAGTCAG
CTCCGGTGGGGAGAACACGGGGGACACCGGGGGGCTCAGCGGGGAGCTGGGGGCCGTCAC
CAGGGATGATTCAGACGCTGAGGAGGACTGGTTGACGCTGAAGGCCATGTCAGAATCGCT
ATCGTCCTGGGAGCCGCTGAGAGACCCTGATGGNNGAGTGGTCGCANGGCTGGACT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               185-338, - strand, RNAz p=0.849381

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               185-338, - strand, RNAz p=0.849381

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               184-660, gnl|bosTau2|chr20 (3026568-3026093)
               

               
               184-660, gnl|Hg17|chr5 (172046768-172046288)
               

               
               184-660, gnl|Mm7|chr17 (24626608-24626097)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               184-660, gnl|bosTau2|chr20 (3026568-3026093)
               

               
               184-660, gnl|Hg17|chr5 (172046768-172046288)
               

               
               184-660, gnl|Mm7|chr17 (24626608-24626097)

	184-660, gnl\|bosTau2\|chr20 (3026568-3026093)
	184-660, gnl\|Hg17\|chr5 (172046768-172046288)
	184-660, gnl\|Mm7\|chr17 (24626608-24626097)