Non-Coding RNA Search

Mixn-0022e24

Sequence:


               
               CAAAAAAGAAGCTCTACTTCTGGCTTTACTTGCCTTTGCCCCGCACATTGATTTTTACTC
TCCTTGGCAAACATTCACTTTTATTCTCCTTGGAGTATCTCCAGATTCCTCAAATGAGAT
GGCCCACGTCTCTAAGCCACTGTTCCTTTAATGCAATAAAACAATCAGACGGTGCTTTTA
GAAGGAGGTCAGCAGGGTGCCCTCAAGTTGAGAATCCTTAGTCGTTGGGAATTCAGAGAG
TCGGCAGCACAGCTGTTGAGATGAACACAGGCTGAGCTTCTCTCTCTCAGACCACCATGT
GCCTCTAGACTGAAAATGCAGAGTGATTGATGCAGTGGCACGGGATGGCTTGTGTTCCCT
GCAGAGGCTGATAGATTCGAATTGGAGAGAGTACTCAGTTTCCATCATTGAAAATTAGGT
AGACAGACAGTACCCAGGCTCTGCAGCTCTCGGAGTCATTATTCCCGCAAATGGATGAAT
TGGCCTCTTGAGGTGGGGTTGCCACGGGTCCTGAAGGATGCCCCTCTTTGCCACATTACT
GCTCGCCCTTCACTCTGCTTCTGAAAGTCACTCCCGGAAACCCACATTCCTCTGCACCTG
TGAAGCCTGATTTATCAGCCAACTCCTCAGAGAAGAAACAACAAGATTAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAAAAAGAAGCTCTACTTCTGGCTTTACTTGCCTTTGCCCCGCACATTGATTTTTACTC
TCCTTGGCAAACATTCACTTTTATTCTCCTTGGAGTATCTCCAGATTCCTCAAATGAGAT
GGCCCACGTCTCTAAGCCACTGTTCCTTTAATGCAATAAAACAATCAGACGGTGCTTTTA
GAAGGAGGTCAGCAGGGTGCCCTCAAGTTGAGAATCCTTAGTCGTTGGGAATTCAGAGAG
TCGGCAGCACAGCTGTTGAGATGAACACAGGCTGAGCTTCTCTCTCTCAGACCACCATGT
GCCTCTAGACTGAAAATGCAGAGTGATTGATGCAGTGGCACGGGATGGCTTGTGTTCCCT
GCAGAGGCTGATAGATTCGAATTGGAGAGAGTACTCAGTTTCCATCATTGAAAATTAGGT
AGACAGACAGTACCCAGGCTCTGCAGCTCTCGGAGTCATTATTCCCGCAAATGGATGAAT
TGGCCTCTTGAGGTGGGGTTGCCACGGGTCCTGAAGGATGCCCCTCTTTGCCACATTACT
GCTCGCCCTTCACTCTGCTTCTGAAAGTCACTCCCGGAAACCCACATTCCTCTGCACCTG
TGAAGCCTGATTTATCAGCCAACTCCTCAGAGAAGAAACAACAAGATTAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               274-393, - strand, RNAz p=0.597971

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               274-393, - strand, RNAz p=0.597971

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-659, gnl|bosTau2|chr15 (40764224-40763598)
               

               
               2-659, gnl|Hg17|chr11 (36163305-36163948)
               

               
               2-659, gnl|Mm7|chr2 (101841021-101840390)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-659, gnl|bosTau2|chr15 (40764224-40763598)
               

               
               2-659, gnl|Hg17|chr11 (36163305-36163948)
               

               
               2-659, gnl|Mm7|chr2 (101841021-101840390)

	2-659, gnl\|bosTau2\|chr15 (40764224-40763598)
	2-659, gnl\|Hg17\|chr11 (36163305-36163948)
	2-659, gnl\|Mm7\|chr2 (101841021-101840390)