Non-Coding RNA Search

Mixn-0022p07

Sequence:


               
               CTGGAGCTAAGAGTCAAGGCCTGCTCTCCAATCCCTCTCCTCCTGGTGTCTCCATTTCCA
CACATCAATTGTGCGGTATCTTCAAAGGGAAGGGATCTAGCGGGAATCACGTGCAGCTGT
GGTTTGTGGGTAACACCCACAGCAGCAGAATTTCCCCCGCCATATGAACAGATAGGTTTT
GGTGGGCATCAGGGAGTCATTTGGTTTTCATCTTAGGGTATTTGCCTTCTTTGTTTCCAG
CTTGCAAACCTCAAGGAAACACCCAGAACAACCACGTGATAGAAGGAAACATACCAATGG
ACAGGGGGCATCTAATCCAGGCGCTCCTTGGTCTCCCTTATCCCCCTTAGGCCCTCTAGA
GCCTTTCTTCCCCCTTTCCCCCTGTAAATAATGGTTTAGTCCAAGAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGAGCTAAGAGTCAAGGCCTGCTCTCCAATCCCTCTCCTCCTGGTGTCTCCATTTCCA
CACATCAATTGTGCGGTATCTTCAAAGGGAAGGGATCTAGCGGGAATCACGTGCAGCTGT
GGTTTGTGGGTAACACCCACAGCAGCAGAATTTCCCCCGCCATATGAACAGATAGGTTTT
GGTGGGCATCAGGGAGTCATTTGGTTTTCATCTTAGGGTATTTGCCTTCTTTGTTTCCAG
CTTGCAAACCTCAAGGAAACACCCAGAACAACCACGTGATAGAAGGAAACATACCAATGG
ACAGGGGGCATCTAATCCAGGCGCTCCTTGGTCTCCCTTATCCCCCTTAGGCCCTCTAGA
GCCTTTCTTCCCCCTTTCCCCCTGTAAATAATGGTTTAGTCCAAGAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               300-415, - strand, RNAz p=0.797238

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               300-415, - strand, RNAz p=0.797238

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-415, gnl|bosTau2|chr28 (19593729-19594141)
               

               
               3-415, gnl|Hg17|chr10 (71383041-71382616)
               

               
               3-415, gnl|Mm7|chr10 (61361734-61362151)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-415, gnl|bosTau2|chr28 (19593729-19594141)
               

               
               3-415, gnl|Hg17|chr10 (71383041-71382616)
               

               
               3-415, gnl|Mm7|chr10 (61361734-61362151)

	3-415, gnl\|bosTau2\|chr28 (19593729-19594141)
	3-415, gnl\|Hg17\|chr10 (71383041-71382616)
	3-415, gnl\|Mm7\|chr10 (61361734-61362151)