Non-Coding RNA Search

Mixn-0023n15

Sequence:


               
               TGTTCCCACTGCCAGGAGGCTGGCGCCACCTTGGGCTGCTACAACAAAGGCTGCTCCTTC
CGATACCATTACCCGTGTGCCATTGACGCAGATTGTTTGCTCCATGAGGAGAACTTCTCG
GTGAGGTGCCCCAAGCACAAGCCTCCCCTCCCATGCCCTCTCCCCCACTTGCAGAACAAG
ACAGCGAAAGGCAGCCTCAGCACAGAGCAGTCCGAGCGGGGGTGAGGGGGGCAGTGTGCT
CGTGGGAATGGAAAGTACAGCAAGCACAGGTGAGTCGGGGCCGCCACCCCTGCCAGACTC
CAAGGGTGTCGTAGCCTCTGCCCTGTCGCCCAGCCAGGCTGCACCGCCAGCGTCTAATCG
CACGGACTGCCAGCACCAGGTGGATGAGGTGTTGGTTCATTTGTTGCTTAGCTCCCCAGA
ATACGTGTGGAGAGGTGGCGTGAGGCTTCGGTCCCATCGTCCATTGAGCTTCAGGGTGAC
TGTTCCCCGAGGCAAGCCTGTTTGTGGAGTTCCTGGGGGCAGGTGGCAGCAGACTTCTGG
GATGGACCCTCTGGGCTGGGGCACTTCTGCCAGCAACCCTCACTCTGCCTGTTTCAGAAA
GGCTTCTTGCCAGAGGTCTTTTCTTTTTAATTAATTGATTTACTCTCTCTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTTCCCACTGCCAGGAGGCTGGCGCCACCTTGGGCTGCTACAACAAAGGCTGCTCCTTC
CGATACCATTACCCGTGTGCCATTGACGCAGATTGTTTGCTCCATGAGGAGAACTTCTCG
GTGAGGTGCCCCAAGCACAAGCCTCCCCTCCCATGCCCTCTCCCCCACTTGCAGAACAAG
ACAGCGAAAGGCAGCCTCAGCACAGAGCAGTCCGAGCGGGGGTGAGGGGGGCAGTGTGCT
CGTGGGAATGGAAAGTACAGCAAGCACAGGTGAGTCGGGGCCGCCACCCCTGCCAGACTC
CAAGGGTGTCGTAGCCTCTGCCCTGTCGCCCAGCCAGGCTGCACCGCCAGCGTCTAATCG
CACGGACTGCCAGCACCAGGTGGATGAGGTGTTGGTTCATTTGTTGCTTAGCTCCCCAGA
ATACGTGTGGAGAGGTGGCGTGAGGCTTCGGTCCCATCGTCCATTGAGCTTCAGGGTGAC
TGTTCCCCGAGGCAAGCCTGTTTGTGGAGTTCCTGGGGGCAGGTGGCAGCAGACTTCTGG
GATGGACCCTCTGGGCTGGGGCACTTCTGCCAGCAACCCTCACTCTGCCTGTTTCAGAAA
GGCTTCTTGCCAGAGGTCTTTTCTTTTTAATTAATTGATTTACTCTCTCTAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q5HYV8_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q5HYV8_HUMAN

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               545-653, + strand, RNAz p=0.595306

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               545-653, + strand, RNAz p=0.595306

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of NM_005650, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of NM_005650, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               140-653, gnl|bosTau2|chr5 (68578615-68578104)
               

               
               140-653, gnl|Hg17|chr22 (40889242-40888705)
               

               
               140-653, gnl|Mm7|chr15 (82899002-82898502)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               140-653, gnl|bosTau2|chr5 (68578615-68578104)
               

               
               140-653, gnl|Hg17|chr22 (40889242-40888705)
               

               
               140-653, gnl|Mm7|chr15 (82899002-82898502)

	140-653, gnl\|bosTau2\|chr5 (68578615-68578104)
	140-653, gnl\|Hg17\|chr22 (40889242-40888705)
	140-653, gnl\|Mm7\|chr15 (82899002-82898502)