Non-Coding RNA Search

Mixn-0024b23

Sequence:


               
               CGCGCTCTTGGGCATCCCGCTCACGCTGGTCATGTTCCAGAGCCTGGGCGAGCGCATCAA
CACCTTCGTGAAGTACCTGCTGCACCGCGCCAAGAGGGGGCTGGGCATGCGGCGCGCCGA
CGTGTCCATGGCCAACATGGTGCTCATCGGCTTCTTCTCGTGCATTAGCACGCTGTGCAT
AGGCGCCGCCGCCTTCTCCTACTACGAGCACTGGACCTTCTTTCAGGCCTACTACTACTG
CTTCATCACGCTCACCACCATCGGCTTCGGCGACTACGTGGCGCTGCAGAAGGACCAGGC
GCTGCAGACGCAGCCGCAGTACGTGGCCTTTAGCTTCGTCTACATCCTCACGGGCCTCAC
GGTCATCGGCGCCTTTCTGAACCTCGTGGTGCTGCGCTTCATGACCATGAACGCCGAGGA
CGAGAAGCGCGACGCCGAGCACCGCGCGCTGCTCACGCGCAACGGGCAGGCGGGCGGAGG
CGGCGGCGCGGGCTGCGCGGGTGGCAGCGCGCACACCACGGACACCGCCTCGTCCACGGC
GGCGGCGGGCGGCGGCGGCGGCTTCCGCAACGTCTACGCCGAGGTGCTGCACTTCCAGTC
CATGTGCTCGTGCCTCTGGTACAAGAGCCGCGAGAAGCTGCAGTACTCCATCCCCATGAT
CATCCCGCGGGACCTCTCCACGTCCGACACGTGCGTCGAGCAGAGCCACTCGTCCCCGGG
GAGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCGCTCTTGGGCATCCCGCTCACGCTGGTCATGTTCCAGAGCCTGGGCGAGCGCATCAA
CACCTTCGTGAAGTACCTGCTGCACCGCGCCAAGAGGGGGCTGGGCATGCGGCGCGCCGA
CGTGTCCATGGCCAACATGGTGCTCATCGGCTTCTTCTCGTGCATTAGCACGCTGTGCAT
AGGCGCCGCCGCCTTCTCCTACTACGAGCACTGGACCTTCTTTCAGGCCTACTACTACTG
CTTCATCACGCTCACCACCATCGGCTTCGGCGACTACGTGGCGCTGCAGAAGGACCAGGC
GCTGCAGACGCAGCCGCAGTACGTGGCCTTTAGCTTCGTCTACATCCTCACGGGCCTCAC
GGTCATCGGCGCCTTTCTGAACCTCGTGGTGCTGCGCTTCATGACCATGAACGCCGAGGA
CGAGAAGCGCGACGCCGAGCACCGCGCGCTGCTCACGCGCAACGGGCAGGCGGGCGGAGG
CGGCGGCGCGGGCTGCGCGGGTGGCAGCGCGCACACCACGGACACCGCCTCGTCCACGGC
GGCGGCGGGCGGCGGCGGCGGCTTCCGCAACGTCTACGCCGAGGTGCTGCACTTCCAGTC
CATGTGCTCGTGCCTCTGGTACAAGAGCCGCGAGAAGCTGCAGTACTCCATCCCCATGAT
CATCCCGCGGGACCTCTCCACGTCCGACACGTGCGTCGAGCAGAGCCACTCGTCCCCGGG
GAGGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|10801600|dbj|BAB16711.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|10801600|dbj|BAB16711.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               120-239, - strand, RNAz p=0.916679

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               120-239, - strand, RNAz p=0.916679

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-725, gnl|bosTau2|chr11 (55163014-55163747)
               

               
               1-725, gnl|Hg17|chr2 (26862241-26862949)
               

               
               1-725, gnl|Mm7|chr5 (29654463-29655216)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-725, gnl|bosTau2|chr11 (55163014-55163747)
               

               
               1-725, gnl|Hg17|chr2 (26862241-26862949)
               

               
               1-725, gnl|Mm7|chr5 (29654463-29655216)

	1-725, gnl\|bosTau2\|chr11 (55163014-55163747)
	1-725, gnl\|Hg17\|chr2 (26862241-26862949)
	1-725, gnl\|Mm7\|chr5 (29654463-29655216)