Non-Coding RNA Search

Mixn-0025a12

Sequence:


               
               GTGAGGGAGGGGGCTGCTGTAACTCACAGAGACGCCCTCGAAGGACGAGGAGTTCATTGC
CCGATAGATCTGGTCAGTTATGGTCTGGTTGTTGTAGTTAAAGTCTTCCAGGCGCACTCC
CGAACGGCCACCCCCTCCAGACGTCTTGTTCAGAGCCAAAGCTAAGGCCCAGATGGCATC
ATAGGCCAGAGGTGCCTCCTGGAAGCCTCCTGTCTCCTCAGGGTGTCTTTTTAGTCTCTT
GGTCAGTTTCTCCACAAACTCCTGGGATGTCATGTTGGAAATGCTGCGGGTGTTGGCAGG
GTTCAGCATGACAATCTCAGTGGTGATGTGGCCTTCCACCGCCTCGGTCATCTCGTCCAC
TGTGCAGTTGATGGACGGGTCATAGATCTTGAACCAGTTGTCAGCATACCACCCAATGAG
GAACCAGACGTACTTCTTCCCGAAGAGCCGCTCCTTGTACACCTCACAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGAGGGAGGGGGCTGCTGTAACTCACAGAGACGCCCTCGAAGGACGAGGAGTTCATTGC
CCGATAGATCTGGTCAGTTATGGTCTGGTTGTTGTAGTTAAAGTCTTCCAGGCGCACTCC
CGAACGGCCACCCCCTCCAGACGTCTTGTTCAGAGCCAAAGCTAAGGCCCAGATGGCATC
ATAGGCCAGAGGTGCCTCCTGGAAGCCTCCTGTCTCCTCAGGGTGTCTTTTTAGTCTCTT
GGTCAGTTTCTCCACAAACTCCTGGGATGTCATGTTGGAAATGCTGCGGGTGTTGGCAGG
GTTCAGCATGACAATCTCAGTGGTGATGTGGCCTTCCACCGCCTCGGTCATCTCGTCCAC
TGTGCAGTTGATGGACGGGTCATAGATCTTGAACCAGTTGTCAGCATACCACCCAATGAG
GAACCAGACGTACTTCTTCCCGAAGAGCCGCTCCTTGTACACCTCACAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               89-208, - strand, RNAz p=0.639986

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               89-208, - strand, RNAz p=0.639986

Aligned organism(s): 16 entry(ies)

More info

Aligned organism(s): 16 entry(ies)

Help | Less info


               
               10-271, gnl|bosTau2|chr23 (24074386-24074125)
               

               
               10-271, gnl|canFam2|chr35 (29239902-29240137)
               

               
               10-271, gnl|danRer3|chr15 (38422812-38423028)
               

               
               10-271, gnl|echTel1|scaffold_225284 (4776-5011)
               

               
               10-271, gnl|fr1|chrUn (175709514-175709310)
               

               
               10-271, gnl|hg17|chr6 (29688962-29689196)
               

               
               10-271, gnl|Hg17|chr6 (29688981-29689242)
               

               
               10-271, gnl|loxAfr1|scaffold_15223 (4043-4278)
               

               
               10-271, gnl|mm7|chr17 (35214348-35214121)
               

               
               10-271, gnl|Mm7|chr17 (35214334-35214073)
               

               
               10-271, gnl|monDom2|scaffold_42 (19292203-19291958)
               

               
               10-271, gnl|panTro1|chr5_random (22651497-22651263)
               

               
               10-271, gnl|rheMac2|chr4 (29347373-29347607)
               

               
               10-271, gnl|rn3|chr20 (1566039-1566266)
               

               
               10-271, gnl|tetNig1|chrUn_random (31585795-31585593)
               

               
               10-271, gnl|xenTro1|scaffold_726 (43985-44219)

Aligned organism(s): 16 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-271, gnl|bosTau2|chr23 (24074386-24074125)
               

               
               10-271, gnl|canFam2|chr35 (29239902-29240137)
               

               
               10-271, gnl|danRer3|chr15 (38422812-38423028)
               

               
               10-271, gnl|echTel1|scaffold_225284 (4776-5011)
               

               
               10-271, gnl|fr1|chrUn (175709514-175709310)
               

               
               10-271, gnl|hg17|chr6 (29688962-29689196)
               

               
               10-271, gnl|Hg17|chr6 (29688981-29689242)
               

               
               10-271, gnl|loxAfr1|scaffold_15223 (4043-4278)
               

               
               10-271, gnl|mm7|chr17 (35214348-35214121)
               

               
               10-271, gnl|Mm7|chr17 (35214334-35214073)
               

               
               10-271, gnl|monDom2|scaffold_42 (19292203-19291958)
               

               
               10-271, gnl|panTro1|chr5_random (22651497-22651263)
               

               
               10-271, gnl|rheMac2|chr4 (29347373-29347607)
               

               
               10-271, gnl|rn3|chr20 (1566039-1566266)
               

               
               10-271, gnl|tetNig1|chrUn_random (31585795-31585593)
               

               
               10-271, gnl|xenTro1|scaffold_726 (43985-44219)

	10-271, gnl\|bosTau2\|chr23 (24074386-24074125)
	10-271, gnl\|canFam2\|chr35 (29239902-29240137)
	10-271, gnl\|danRer3\|chr15 (38422812-38423028)
	10-271, gnl\|echTel1\|scaffold_225284 (4776-5011)
	10-271, gnl\|fr1\|chrUn (175709514-175709310)
	10-271, gnl\|hg17\|chr6 (29688962-29689196)
	10-271, gnl\|Hg17\|chr6 (29688981-29689242)
	10-271, gnl\|loxAfr1\|scaffold_15223 (4043-4278)
	10-271, gnl\|mm7\|chr17 (35214348-35214121)
	10-271, gnl\|Mm7\|chr17 (35214334-35214073)
	10-271, gnl\|monDom2\|scaffold_42 (19292203-19291958)
	10-271, gnl\|panTro1\|chr5_random (22651497-22651263)
	10-271, gnl\|rheMac2\|chr4 (29347373-29347607)
	10-271, gnl\|rn3\|chr20 (1566039-1566266)
	10-271, gnl\|tetNig1\|chrUn_random (31585795-31585593)
	10-271, gnl\|xenTro1\|scaffold_726 (43985-44219)