Non-Coding RNA Search

Mixn-0025c07

Sequence:


               
               CCAGCTGGGACTACTGTGGACACCAACATCACCCACCCATTTGAGTTTGACTTCTATCTG
TGCAGCCACGCAGGCATCCAGGGCACCAGCCGACCATCCCATTACTATGTCCTTTGGGAT
GACAACCGTTTCACAGCGGATGAGCTCCAGATCTTGACGTACCAGCTGTGCCACACTTAT
GTACGATGCACACGCTCCGTCTCAATTCCAGCACCTGCCTACTATGCCCGCTTGGTGGCT
TTCCGGGCAAGATACCACCTAGTGGACAAGGAGCATGACAGTGGAGAGGGGAGCCACATA
TCGGGGCAGAGCAATGGGCGGGACCCCCAGGCCCTGGCCAAAGCCGTGCAGGTTCACCAG
GATACTCTGCGCACCATGTACTTCGCTTGAAGGCAGAACGCTGTTACCTCACTGGATAGA
AGAAAGCTTTCCAAGCCCCAAGAGCTGTGCCACCCAAATCCAGAGGAAGCAGGGAGGAGG
GAGGTGGGGTAGGGAGGAATGCAGAAGGCCTTGGTACCTTCTACTTCTATACAGGGGGCG
AAAGGGTGGGGAAGAGGGCCAGTAAGCCAGACCACCAGCCAGAAATCTCTGATATTCACC
TCACGCCCTCCACCCCTCACCTCATCTTGTCACATCTGGCCCTGACCCCACTGGACCAAG
AGAGGCAGCACTGGTGCCCACCATACACACAGGTGTTTCATGTGACTCACAGTGCTAAAG
ACTCATGCCTGACAGCTTGGTAAGGTCGGCTCTGCAGCCCTGCGGACAAAAGCTGGTAGG
TTTGGGGTTTGATAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCAGCTGGGACTACTGTGGACACCAACATCACCCACCCATTTGAGTTTGACTTCTATCTG
TGCAGCCACGCAGGCATCCAGGGCACCAGCCGACCATCCCATTACTATGTCCTTTGGGAT
GACAACCGTTTCACAGCGGATGAGCTCCAGATCTTGACGTACCAGCTGTGCCACACTTAT
GTACGATGCACACGCTCCGTCTCAATTCCAGCACCTGCCTACTATGCCCGCTTGGTGGCT
TTCCGGGCAAGATACCACCTAGTGGACAAGGAGCATGACAGTGGAGAGGGGAGCCACATA
TCGGGGCAGAGCAATGGGCGGGACCCCCAGGCCCTGGCCAAAGCCGTGCAGGTTCACCAG
GATACTCTGCGCACCATGTACTTCGCTTGAAGGCAGAACGCTGTTACCTCACTGGATAGA
AGAAAGCTTTCCAAGCCCCAAGAGCTGTGCCACCCAAATCCAGAGGAAGCAGGGAGGAGG
GAGGTGGGGTAGGGAGGAATGCAGAAGGCCTTGGTACCTTCTACTTCTATACAGGGGGCG
AAAGGGTGGGGAAGAGGGCCAGTAAGCCAGACCACCAGCCAGAAATCTCTGATATTCACC
TCACGCCCTCCACCCCTCACCTCATCTTGTCACATCTGGCCCTGACCCCACTGGACCAAG
AGAGGCAGCACTGGTGCCCACCATACACACAGGTGTTTCATGTGACTCACAGTGCTAAAG
ACTCATGCCTGACAGCTTGGTAAGGTCGGCTCTGCAGCCCTGCGGACAAAAGCTGGTAGG
TTTGGGGTTTGATAC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|51710516|ref|XP_485538.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|51710516|ref|XP_485538.1|

Aligned organism(s): 22 entry(ies)

More info

Aligned organism(s): 22 entry(ies)

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               74-289, gnl|bosTau2|chr14 (2890322-2890107)
               

               
               74-289, gnl|canFam2|chr13 (38222993-38223204)
               

               
               74-289, gnl|danRer3|chrNA (12545334-12545537)
               

               
               74-289, gnl|dasNov1|scaffold_167241 (3474-3685)
               

               
               74-289, gnl|echTel1|scaffold_286965 (248-37)
               

               
               74-289, gnl|fr1|chrUn (71265731-71265941)
               

               
               74-289, gnl|galGal2|chr2 (138253012-138252801)
               

               
               74-289, gnl|hg17|chr8 (141611688-141611899)
               

               
               74-289, gnl|Hg17|chr8 (141611903-141611689)
               

               
               74-289, gnl|loxAfr1|scaffold_31811 (19523-19312)
               

               
               74-289, gnl|mm7|chr15 (73186899-73187110)
               

               
               74-289, gnl|Mm7|chr15 (73187114-73186900)
               

               
               74-289, gnl|monDom2|scaffold_3 (5805039-5804828)
               

               
               74-289, gnl|oryCun1|scaffold_83112 (6258-6047)
               

               
               74-289, gnl|panTro1|chr7_random (11433136-11433347)
               

               
               74-289, gnl|rheMac2|chr8 (143020568-143020779)
               

               
               74-289, gnl|rn3|chr7 (110862362-110862573)
               

               
               74-289, gnl|tetNig1|chr21_random (1116082-1116293)
               

               
               74-289, gnl|xenTro1|scaffold_161 (1303418-1303625)
               


               
               606-795, gnl|bosTau2|chr3 (76958882-76958694)
               

               
               606-795, gnl|Hg17|chr1 (36054512-36054700)
               

               
               606-795, gnl|Mm7|chr4 (125883939-125883758)

Aligned organism(s): 22 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               74-289, gnl|bosTau2|chr14 (2890322-2890107)
               

               
               74-289, gnl|canFam2|chr13 (38222993-38223204)
               

               
               74-289, gnl|danRer3|chrNA (12545334-12545537)
               

               
               74-289, gnl|dasNov1|scaffold_167241 (3474-3685)
               

               
               74-289, gnl|echTel1|scaffold_286965 (248-37)
               

               
               74-289, gnl|fr1|chrUn (71265731-71265941)
               

               
               74-289, gnl|galGal2|chr2 (138253012-138252801)
               

               
               74-289, gnl|hg17|chr8 (141611688-141611899)
               

               
               74-289, gnl|Hg17|chr8 (141611903-141611689)
               

               
               74-289, gnl|loxAfr1|scaffold_31811 (19523-19312)
               

               
               74-289, gnl|mm7|chr15 (73186899-73187110)
               

               
               74-289, gnl|Mm7|chr15 (73187114-73186900)
               

               
               74-289, gnl|monDom2|scaffold_3 (5805039-5804828)
               

               
               74-289, gnl|oryCun1|scaffold_83112 (6258-6047)
               

               
               74-289, gnl|panTro1|chr7_random (11433136-11433347)
               

               
               74-289, gnl|rheMac2|chr8 (143020568-143020779)
               

               
               74-289, gnl|rn3|chr7 (110862362-110862573)
               

               
               74-289, gnl|tetNig1|chr21_random (1116082-1116293)
               

               
               74-289, gnl|xenTro1|scaffold_161 (1303418-1303625)
               


               
               606-795, gnl|bosTau2|chr3 (76958882-76958694)
               

               
               606-795, gnl|Hg17|chr1 (36054512-36054700)
               

               
               606-795, gnl|Mm7|chr4 (125883939-125883758)

	74-289, gnl\|bosTau2\|chr14 (2890322-2890107)
	74-289, gnl\|canFam2\|chr13 (38222993-38223204)
	74-289, gnl\|danRer3\|chrNA (12545334-12545537)
	74-289, gnl\|dasNov1\|scaffold_167241 (3474-3685)
	74-289, gnl\|echTel1\|scaffold_286965 (248-37)
	74-289, gnl\|fr1\|chrUn (71265731-71265941)
	74-289, gnl\|galGal2\|chr2 (138253012-138252801)
	74-289, gnl\|hg17\|chr8 (141611688-141611899)
	74-289, gnl\|Hg17\|chr8 (141611903-141611689)
	74-289, gnl\|loxAfr1\|scaffold_31811 (19523-19312)
	74-289, gnl\|mm7\|chr15 (73186899-73187110)
	74-289, gnl\|Mm7\|chr15 (73187114-73186900)
	74-289, gnl\|monDom2\|scaffold_3 (5805039-5804828)
	74-289, gnl\|oryCun1\|scaffold_83112 (6258-6047)
	74-289, gnl\|panTro1\|chr7_random (11433136-11433347)
	74-289, gnl\|rheMac2\|chr8 (143020568-143020779)
	74-289, gnl\|rn3\|chr7 (110862362-110862573)
	74-289, gnl\|tetNig1\|chr21_random (1116082-1116293)
	74-289, gnl\|xenTro1\|scaffold_161 (1303418-1303625)

	606-795, gnl\|bosTau2\|chr3 (76958882-76958694)
	606-795, gnl\|Hg17\|chr1 (36054512-36054700)
	606-795, gnl\|Mm7\|chr4 (125883939-125883758)