Mixn-0025l09
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CACAAATTAGATAGAGATGAAAGCAGTCCTGAAAGGACCGGATTGAGGAGGCCTCGGATG
TTAACCTAAGGTTCAGGCACCTGAACCTTGGTGAGCAGCGGGAGCCAGGGAGGGTTTCTG
AGCAGTGGCAGTGTCATGAACAGAGCTTCCTTTGCAGAGGAAGATCATTTTGGTGACCTG
GAGAGAGGGAGAAGGTGGGAGATGGGAGAAAGGAAGTCATAATCTCCTTTCTGCCCCCGC
ATCCGCCTTCCCACCCCAATCCCCCGAGGCTCTGCCCTGCAGCCTGGGCACCTGGAACTT
GGTTTTGAGGCCTGCTTCCTTACAGCCCATGACTCATTCCCCAGGGCCACGCGTGCCTGG
CCGCTCAGCCTTCGGAGGCCTAGCCTTGTGAATGACGAGTATCTTGCTGTGCCAGCCAAT
CAGACAGTAGTCAGGGGCTGGCTGGAGGTGGGGTGGGAGATCTGATTGCTTCTCAGAGAC
AGCTGATGGAGAGAGGCAGAAAAGGAGCAGGCCTTGGCCTCTTGGGCCTGGCTGTCCATC
CTGAGAACTTGGAATTTGGAAGAAGTGCATCCAGCCAGCCTGGCAGACACCAAAAATCAC
AAAATGACCAGAACCTAATTCAGGTTGATAGATTCAATGTTCCTCGAACGTGTGGTCCTC
CTTCCAAATAAACCTGCCATATGGGAAAAAAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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CACAAATTAGATAGAGATGAAAGCAGTCCTGAAAGGACCGGATTGAGGAGGCCTCGGATG
TTAACCTAAGGTTCAGGCACCTGAACCTTGGTGAGCAGCGGGAGCCAGGGAGGGTTTCTG
AGCAGTGGCAGTGTCATGAACAGAGCTTCCTTTGCAGAGGAAGATCATTTTGGTGACCTG
GAGAGAGGGAGAAGGTGGGAGATGGGAGAAAGGAAGTCATAATCTCCTTTCTGCCCCCGC
ATCCGCCTTCCCACCCCAATCCCCCGAGGCTCTGCCCTGCAGCCTGGGCACCTGGAACTT
GGTTTTGAGGCCTGCTTCCTTACAGCCCATGACTCATTCCCCAGGGCCACGCGTGCCTGG
CCGCTCAGCCTTCGGAGGCCTAGCCTTGTGAATGACGAGTATCTTGCTGTGCCAGCCAAT
CAGACAGTAGTCAGGGGCTGGCTGGAGGTGGGGTGGGAGATCTGATTGCTTCTCAGAGAC
AGCTGATGGAGAGAGGCAGAAAAGGAGCAGGCCTTGGCCTCTTGGGCCTGGCTGTCCATC
CTGAGAACTTGGAATTTGGAAGAAGTGCATCCAGCCAGCCTGGCAGACACCAAAAATCAC
AAAATGACCAGAACCTAATTCAGGTTGATAGATTCAATGTTCCTCGAACGTGTGGTCCTC
CTTCCAAATAAACCTGCCATATGGGAAAAAAAAAA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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176-404, - strand, RNAmicro p=0.996665 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
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176-404, - strand, RNAmicro p=0.996665 |
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1-437, gnl|bosTau2|chr12 (27420375-27419948) |
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1-437, gnl|Hg17|chr5 (171819891-171819463) |
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1-437, gnl|Mm7|chr11 (32293707-32294087) |
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466-684, gnl|bosTau2|chr12 (27419890-27419673) |
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466-684, gnl|canFam2|chr4 (43041044-43040243) |
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466-684, gnl|dasNov1|scaffold_14178 (4940-4139) |
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466-684, gnl|echTel1|scaffold_304384 (11239-11975) |
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466-684, gnl|hg17|chr5 (171818794-171819594) |
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466-684, gnl|Hg17|chr5 (171819440-171819223) |
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466-684, gnl|mm7|chr11 (32294709-32293979) |
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466-684, gnl|Mm7|chr11 (32294143-32294346) |
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466-684, gnl|panTro1|chr4 (179141305-179142105) |
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466-684, gnl|rheMac2|chr6 (168844581-168845380) |
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466-684, gnl|rn3|chr10 (17180141-17179403) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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1-437, gnl|bosTau2|chr12 (27420375-27419948) |
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1-437, gnl|Hg17|chr5 (171819891-171819463) |
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1-437, gnl|Mm7|chr11 (32293707-32294087) |
| |
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466-684, gnl|bosTau2|chr12 (27419890-27419673) |
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466-684, gnl|canFam2|chr4 (43041044-43040243) |
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466-684, gnl|dasNov1|scaffold_14178 (4940-4139) |
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466-684, gnl|echTel1|scaffold_304384 (11239-11975) |
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466-684, gnl|hg17|chr5 (171818794-171819594) |
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466-684, gnl|Hg17|chr5 (171819440-171819223) |
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466-684, gnl|mm7|chr11 (32294709-32293979) |
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466-684, gnl|Mm7|chr11 (32294143-32294346) |
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466-684, gnl|panTro1|chr4 (179141305-179142105) |
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466-684, gnl|rheMac2|chr6 (168844581-168845380) |
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466-684, gnl|rn3|chr10 (17180141-17179403) |
