Non-Coding RNA Search

Mixn-0025n17

Sequence:


               
               CTGAAAAATGTGCTTCTTGTTAGAAAACTTGTCTGTATGTGAATGCCTCCCCCCACCAGT
CTCATTTCTCTCTTATCCTCTGCCTCCACCCTCAAACTGACTTTCAATAGCCTTTCTAAG
AGCTTTGAACTGAATGTTCTTTTAGCCAAAACTTGGCCACTTCCACTGTAGAATCAGACC
AGCGAGAAGGAGAGGAGATATCTGACCTTTTGGAACGCCCCATTATGATCCAGGTCTGCT
TTCCCATTTATGGCTCAGGGAGGAGCTTGGGGCTGGAGGCAAAGGAAAAGGAAGTGGTGG
CTTGACTGTTCTCCTGCTTAGGGCACTGAAGATTTGATCCCTTTTTGCCTCTACTTTTAA
AAGAACTGAATGTTCTCTGACTGACCCCATGCAGCTGCAAGCACCATCCACCCTCCCTTC
AGGGTTTTGTGGGCCTGAACTTCACCAGACTGTATTACAGCCACAGTGGTGAAGCTTGTC
TACTTCTTTGGGCAAGTTCACAGACTCTCTGCTAAGAACCCCCACCACCAAGAAAACTAG
CAAGCCAGCATCTTAACATCTACACCTAGATGCCAGTAGGCTCAAAGACTTGTTACCAAA
TGTCTGTCATCAACTATGAGATTTTTGGATCTCTTAGACAAACTGGAAAAAAGGCATCAA
TGGGATTGGACAAGCTGCGCATCTTGCCCTCATNCCCTAGAGAGAATACCTTCCCATCAA
GTGGATAAATGCCTACTTCCTCCTTCAGAGCAACTAAAGGGGTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGAAAAATGTGCTTCTTGTTAGAAAACTTGTCTGTATGTGAATGCCTCCCCCCACCAGT
CTCATTTCTCTCTTATCCTCTGCCTCCACCCTCAAACTGACTTTCAATAGCCTTTCTAAG
AGCTTTGAACTGAATGTTCTTTTAGCCAAAACTTGGCCACTTCCACTGTAGAATCAGACC
AGCGAGAAGGAGAGGAGATATCTGACCTTTTGGAACGCCCCATTATGATCCAGGTCTGCT
TTCCCATTTATGGCTCAGGGAGGAGCTTGGGGCTGGAGGCAAAGGAAAAGGAAGTGGTGG
CTTGACTGTTCTCCTGCTTAGGGCACTGAAGATTTGATCCCTTTTTGCCTCTACTTTTAA
AAGAACTGAATGTTCTCTGACTGACCCCATGCAGCTGCAAGCACCATCCACCCTCCCTTC
AGGGTTTTGTGGGCCTGAACTTCACCAGACTGTATTACAGCCACAGTGGTGAAGCTTGTC
TACTTCTTTGGGCAAGTTCACAGACTCTCTGCTAAGAACCCCCACCACCAAGAAAACTAG
CAAGCCAGCATCTTAACATCTACACCTAGATGCCAGTAGGCTCAAAGACTTGTTACCAAA
TGTCTGTCATCAACTATGAGATTTTTGGATCTCTTAGACAAACTGGAAAAAAGGCATCAA
TGGGATTGGACAAGCTGCGCATCTTGCCCTCATNCCCTAGAGAGAATACCTTCCCATCAA
GTGGATAAATGCCTACTTCCTCCTTCAGAGCAACTAAAGGGGTCA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               495-762, - strand, RNAz p=0.998618

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               495-762, - strand, RNAz p=0.998618

Predicted microRNA(s): 1 entry(ies)

More info

Predicted microRNA(s): 1 entry(ies)

Help | Less info


               
               681-778, - strand, RNAmicro p=0.999956

Predicted microRNA(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               681-778, - strand, RNAmicro p=0.999956

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-762, gnl|bosTau2|chrX (24870848-24871610)
               

               
               1-762, gnl|Hg17|chrX (66727531-66728291)
               

               
               1-762, gnl|Mm7|chrX (93645032-93645792)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-762, gnl|bosTau2|chrX (24870848-24871610)
               

               
               1-762, gnl|Hg17|chrX (66727531-66728291)
               

               
               1-762, gnl|Mm7|chrX (93645032-93645792)

	1-762, gnl\|bosTau2\|chrX (24870848-24871610)
	1-762, gnl\|Hg17\|chrX (66727531-66728291)
	1-762, gnl\|Mm7\|chrX (93645032-93645792)