Non-Coding RNA Search

Mixn-0026a10

Sequence:


               
               GGCGTGGTGCTCTGGGAGATTTCAACCCTGGCTGAACAACCCTACCAGGGTCTCTCCAAT
GAGCAGGTGCTCAAGTTTGTCATGGATGGCGGGATCCTAGAGGAGCTGGAGAGCTGTCCG
GTTCAGCTGCAGGAGCTGATGCACCGCTGCTGGCAGCAGAACCCACGCCTGCGCCCAACC
TTCACCCACATCCTGGACAGCATACAGGAGGAGCTGCGGCCCTCCTTCCGCCTCCTTTCC
TTCTACCACAGCCCAGAGTGCCGGGGGGCCCGGGCCTCCCTGCTGCCCACAGATACCGAG
CCTGACGTCCCGCCAGCCCCCAAAGAGGCTTCCTCAGACTTCAGCCCCCAAAATGGGGGT
CCAGGGCACTGAGGGGCACCCCATTCCCTGGCTGATGGGCCTCCCACAGGCAGAGAGGAA
GGGACCTGACCTTTGCAGCCATGAGGGGTTGCGATGTTCACACTTCCACCCCATGCTGAG
ATGGGGCGTGGCGAGGGGGCAAGGGGGGGTGCAGAGAGCAGGAGCAGGCAAGACAGAGGG
TGACAGGGTGAGCAGAGCATAGTCGTGGTAGGAAAGGTTTTTTTCGGGAGTCGGAGTTCT
CCATGAGAAAGTAAGAAAGGCCTTGGTAGGAGGAGCAGAGATTAGACCAAGGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGTGGTGCTCTGGGAGATTTCAACCCTGGCTGAACAACCCTACCAGGGTCTCTCCAAT
GAGCAGGTGCTCAAGTTTGTCATGGATGGCGGGATCCTAGAGGAGCTGGAGAGCTGTCCG
GTTCAGCTGCAGGAGCTGATGCACCGCTGCTGGCAGCAGAACCCACGCCTGCGCCCAACC
TTCACCCACATCCTGGACAGCATACAGGAGGAGCTGCGGCCCTCCTTCCGCCTCCTTTCC
TTCTACCACAGCCCAGAGTGCCGGGGGGCCCGGGCCTCCCTGCTGCCCACAGATACCGAG
CCTGACGTCCCGCCAGCCCCCAAAGAGGCTTCCTCAGACTTCAGCCCCCAAAATGGGGGT
CCAGGGCACTGAGGGGCACCCCATTCCCTGGCTGATGGGCCTCCCACAGGCAGAGAGGAA
GGGACCTGACCTTTGCAGCCATGAGGGGTTGCGATGTTCACACTTCCACCCCATGCTGAG
ATGGGGCGTGGCGAGGGGGCAAGGGGGGGTGCAGAGAGCAGGAGCAGGCAAGACAGAGGG
TGACAGGGTGAGCAGAGCATAGTCGTGGTAGGAAAGGTTTTTTTCGGGAGTCGGAGTTCT
CCATGAGAAAGTAAGAAAGGCCTTGGTAGGAGGAGCAGAGATTAGACCAAGGAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               288-447, - strand, RNAz p=0.833255

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               288-447, - strand, RNAz p=0.833255

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               129-654, gnl|bosTau2|chr3 (9857640-9857113)
               

               
               129-654, gnl|Hg17|chr1 (153623969-153623485)
               

               
               129-654, gnl|Mm7|chr3 (87928936-87929571)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               129-654, gnl|bosTau2|chr3 (9857640-9857113)
               

               
               129-654, gnl|Hg17|chr1 (153623969-153623485)
               

               
               129-654, gnl|Mm7|chr3 (87928936-87929571)

	129-654, gnl\|bosTau2\|chr3 (9857640-9857113)
	129-654, gnl\|Hg17\|chr1 (153623969-153623485)
	129-654, gnl\|Mm7\|chr3 (87928936-87929571)