Non-Coding RNA Search

Mixn-0027a23

Sequence:


               
               CCCACTCTCAATAGGAAATGAAAAGTATTTCCTTCTCCTGTAAAATGACTAAGGGCAGAA
ACATTCTTCATTTCCTATTGAGAGTGGGAGGTGAGGATAGGGCTTGGGCCTTGAAATGTG
ACAGGCTGCTATCTGTAGAGCAGGGTAATTTTGGACTTAATGAGGTCCTCCTGTTTCTCT
GAAAAGATATGTATAATACCCACTTGTCACTAAGACAGGTCTGAAGAGGTAAAATATAAA
GAATCATGCTACTGACCCTCTTCCTTTGACATACCAAGAACAGGGGAGAATACAGGACTA
GGTCAAGGGGCAAAGAAAAAGACAAATATTTACCTTTCCCTTGTGGTTAACCTCTGTTGA
AAACCACCAACAAATGTCACTTATGTTAGGGAGGCACCATGGTAAAAATGTCTACTTATT
TAAAAACAAACAAACACAGGGATAATATTTCAGTTGTACATTTGTATCAATTGTCAACTG
TAGTGATTTTCTTTCTGGCTAAAACAGAAGTGAAAACTGAGGGAGAAAGAGTCAAGAAAG
AAAAGCAGGAAGCTAGAGCTTGGTGCAAGATGTGTGAAACTACCTCAGAAATGTTTCCTT
GTTTATGACAGATAGGCAGGTCACAGCATACCATTAATGGGTTCCTTTCTCTATATTGGA
GTTACTTCTTAATTTGACCTTGAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCACTCTCAATAGGAAATGAAAAGTATTTCCTTCTCCTGTAAAATGACTAAGGGCAGAA
ACATTCTTCATTTCCTATTGAGAGTGGGAGGTGAGGATAGGGCTTGGGCCTTGAAATGTG
ACAGGCTGCTATCTGTAGAGCAGGGTAATTTTGGACTTAATGAGGTCCTCCTGTTTCTCT
GAAAAGATATGTATAATACCCACTTGTCACTAAGACAGGTCTGAAGAGGTAAAATATAAA
GAATCATGCTACTGACCCTCTTCCTTTGACATACCAAGAACAGGGGAGAATACAGGACTA
GGTCAAGGGGCAAAGAAAAAGACAAATATTTACCTTTCCCTTGTGGTTAACCTCTGTTGA
AAACCACCAACAAATGTCACTTATGTTAGGGAGGCACCATGGTAAAAATGTCTACTTATT
TAAAAACAAACAAACACAGGGATAATATTTCAGTTGTACATTTGTATCAATTGTCAACTG
TAGTGATTTTCTTTCTGGCTAAAACAGAAGTGAAAACTGAGGGAGAAAGAGTCAAGAAAG
AAAAGCAGGAAGCTAGAGCTTGGTGCAAGATGTGTGAAACTACCTCAGAAATGTTTCCTT
GTTTATGACAGATAGGCAGGTCACAGCATACCATTAATGGGTTCCTTTCTCTATATTGGA
GTTACTTCTTAATTTGACCTTGAAAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               67-186, + strand, RNAz p=0.65225

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               67-186, + strand, RNAz p=0.65225

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               28-652, gnl|bosTau2|chr3 (17026231-17026837)
               

               
               28-652, gnl|Hg17|chr1 (147260105-147259570)
               

               
               28-652, gnl|Mm7|chr3 (95636187-95636733)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               28-652, gnl|bosTau2|chr3 (17026231-17026837)
               

               
               28-652, gnl|Hg17|chr1 (147260105-147259570)
               

               
               28-652, gnl|Mm7|chr3 (95636187-95636733)

	28-652, gnl\|bosTau2\|chr3 (17026231-17026837)
	28-652, gnl\|Hg17\|chr1 (147260105-147259570)
	28-652, gnl\|Mm7\|chr3 (95636187-95636733)