Non-Coding RNA Search

Mixn-0027b05

Sequence:


               
               GGGTGAGGAGGTGGTGTTCCCCAGGAGCACAGACTGGGTCAAAGTGGTGGCACTGGGAGA
GCTCACGCTCTGCGATCGGCTGATGAGCTGGGCAGCGGACGTCGTGGCCAGATTGATGGA
GGCCTGGGTGGTGGTGCTCTGCTGCTGTGCAGTGCTGGTGTTTGGGGAGCTGGCCTGTCG
GCTGGCAGCAATTGTAGCCTGCTGGACGGCAGCCAGGCTATGCAGCTGGGCATTGCTGAG
CTGCTGCTGGAGCATAAACTGGTGGAAATACTGAGCCGCATTGGGCTGACGCTGCAGTGC
TTGCAGAGCCTGCACTGCCTGCCGTTCATACAGTGACATCTGAGCTATCTGGGGCCGAGA
GCTGCCCCCAGAGCTGGAACTCCCATTGGTGGAGCTGGAGTTCTGCTCGCTCTCAGTCTC
CATGATAGAGGTCCAGGGTCCCCAAGGCTGGAACTCTGACTCAAGACCTCCGCGCCGGGC
TCTGCACCCGGGCGCTCCCGGGGGGCGTCCACCTCACGTGCCGGGGTCCCCGGGCGCCGG
GCTGGGCAGGGGGCTCGCTCGGCCTCGGCGGCGGGCTCCCCTCGCCTCCTCCCCTTCCTG
GAGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGTGAGGAGGTGGTGTTCCCCAGGAGCACAGACTGGGTCAAAGTGGTGGCACTGGGAGA
GCTCACGCTCTGCGATCGGCTGATGAGCTGGGCAGCGGACGTCGTGGCCAGATTGATGGA
GGCCTGGGTGGTGGTGCTCTGCTGCTGTGCAGTGCTGGTGTTTGGGGAGCTGGCCTGTCG
GCTGGCAGCAATTGTAGCCTGCTGGACGGCAGCCAGGCTATGCAGCTGGGCATTGCTGAG
CTGCTGCTGGAGCATAAACTGGTGGAAATACTGAGCCGCATTGGGCTGACGCTGCAGTGC
TTGCAGAGCCTGCACTGCCTGCCGTTCATACAGTGACATCTGAGCTATCTGGGGCCGAGA
GCTGCCCCCAGAGCTGGAACTCCCATTGGTGGAGCTGGAGTTCTGCTCGCTCTCAGTCTC
CATGATAGAGGTCCAGGGTCCCCAAGGCTGGAACTCTGACTCAAGACCTCCGCGCCGGGC
TCTGCACCCGGGCGCTCCCGGGGGGCGTCCACCTCACGTGCCGGGGTCCCCGGGCGCCGG
GCTGGGCAGGGGGCTCGCTCGGCCTCGGCGGCGGGCTCCCCTCGCCTCCTCCCCTTCCTG
GAGGG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               295-452, - strand, RNAz p=0.846852

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               295-452, - strand, RNAz p=0.846852

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               345-430, + strand, RNAmicro p=0.979891

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               345-430, + strand, RNAmicro p=0.979891

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of BX640639, -

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of BX640639, -

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               295-469, gnl|bosTau2|chr5 (59550980-59551155)
               

               
               295-469, gnl|Hg17|chr12 (8961670-8961491)
               

               
               295-469, gnl|Mm7|chr6 (122362938-122363111)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               295-469, gnl|bosTau2|chr5 (59550980-59551155)
               

               
               295-469, gnl|Hg17|chr12 (8961670-8961491)
               

               
               295-469, gnl|Mm7|chr6 (122362938-122363111)

	295-469, gnl\|bosTau2\|chr5 (59550980-59551155)
	295-469, gnl\|Hg17\|chr12 (8961670-8961491)
	295-469, gnl\|Mm7\|chr6 (122362938-122363111)