Non-Coding RNA Search

Mixn-0027j01

Sequence:


               
               GCCATTTACATGTGAAACCTGTGGAAAGTCATTCAAACGCAGTATGTCACTCAAGGTGCA
CTCCTTGCAGCATTCTGGAGAGAAGCCCTTCAGATTCGAGAACTGTGACGAAAGGTTTCA
GTACAAGTACCAGCTACGCTCCCACATGAGCATCCACATTGGGCACAAACAGTTCATGTG
CCAGTGGTGTGGCAAGGACTTCAACATGAAGCAGTACTTCGACGAACACATGAAAACACA
CACTGGAGAGAAACCCTTCATCTGTGAAATCTGCGGCAAGAGCTTCACCAGCCGCCCCAA
CATGAAGAGGCACCGCAGAACTCACACAGGCGAGAAGCCCTACCCGTGCGATGTGTGTGG
CCAGCGGTTCCGCTTCTCCAACATGCTTAAGGCCCACAAGGAGAAGTGCTTTCGGGTGAC
CAGCCCCGTGAACGTGCCGCCTGCTGTCCAGATCCCACTCACCAGCGCCCCGGCCACCCC
AGTCCCTTCCGTGGTGAACACCCCCGCGACCCCCGCCCCTCCGATCACCATGAACCCCGT
GAGCACTCTGCCCCCCCGGCCCATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCATTTACATGTGAAACCTGTGGAAAGTCATTCAAACGCAGTATGTCACTCAAGGTGCA
CTCCTTGCAGCATTCTGGAGAGAAGCCCTTCAGATTCGAGAACTGTGACGAAAGGTTTCA
GTACAAGTACCAGCTACGCTCCCACATGAGCATCCACATTGGGCACAAACAGTTCATGTG
CCAGTGGTGTGGCAAGGACTTCAACATGAAGCAGTACTTCGACGAACACATGAAAACACA
CACTGGAGAGAAACCCTTCATCTGTGAAATCTGCGGCAAGAGCTTCACCAGCCGCCCCAA
CATGAAGAGGCACCGCAGAACTCACACAGGCGAGAAGCCCTACCCGTGCGATGTGTGTGG
CCAGCGGTTCCGCTTCTCCAACATGCTTAAGGCCCACAAGGAGAAGTGCTTTCGGGTGAC
CAGCCCCGTGAACGTGCCGCCTGCTGTCCAGATCCCACTCACCAGCGCCCCGGCCACCCC
AGTCCCTTCCGTGGTGAACACCCCCGCGACCCCCGCCCCTCCGATCACCATGAACCCCGT
GAGCACTCTGCCCCCCCGGCCCATCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q9ULN0_HUMAN

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9ULN0_HUMAN

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               109-227, - strand, RNAz p=0.894557

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               109-227, - strand, RNAz p=0.894557

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               70-452, gnl|bosTau2|chr21 (12658991-12659370)
               


               
               75-401, gnl|bosTau2|chr14 (25895363-25895689)
               

               
               75-401, gnl|Hg17|chr19 (49431799-49432125)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               70-452, gnl|bosTau2|chr21 (12658991-12659370)
               


               
               75-401, gnl|bosTau2|chr14 (25895363-25895689)
               

               
               75-401, gnl|Hg17|chr19 (49431799-49432125)

	70-452, gnl\|bosTau2\|chr21 (12658991-12659370)

	75-401, gnl\|bosTau2\|chr14 (25895363-25895689)
	75-401, gnl\|Hg17\|chr19 (49431799-49432125)