Non-Coding RNA Search

Mixn-0029a21

Sequence:


               
               CGAACCCCTCAATTTGTATTTTTCCCTCGATGGCTAATTGGACACTTGACAAATGTTAAG
GCAGAGATGGCTTCAGAGTGAGACAGGCCCTGGATGCTCACTGTGGGCCTTTAACTCCCC
CAAGTGGAGCCCAGAGATGGCTGGGTAACAGCATTTAATTGTCATATTGATTCCGAGCTA
ATGGGGAATCCCCGTGTGATTATGAAGATATTAATACTGCTGCTGTCCCTGCTCAGCCCT
GATGCTGAGAGCCTTTGGTGGGACCCATCACGCCCCACGCTTTCCAGCAGCTCCAGCTTC
CAATCCTTTGTCATCCCCTAGAAACACATGAAAAGGAGACATTTTCTATGTAGGAGTAAA
CTGAGCTAGATCTGTCATCCTGTCTTGCTTTTGTCAGCTATTTTTAATCTCCTAAGACAC
TGATTACTCATTTTGCAAACTTATACTTGTTGATAAATACAGGGATTTGTTCACGGATCA
AATGCACCAAGCCAGGAGACAGACTCCACTCCTCTCGGGCCCAGAAGCGGTCCTCTAAGG
CCCGGGAGCAGCCTGGAGCAGCCTGTCCTGCGGGCTGGCGGGACCTGTGAAACATCAGCT
GGGGCACAGAACCAGCCAGACCACCCTGGGAACCCCAGGAGACGAGGAGCAGCCCAGGAC
AGGCTGCCCCGAGCCCCTTCCCAGCCCAGTGGGATCTGTCTGCCCTCCTTGTAGGAACGA
GGCACAGACTTGGAGGCTCCTGGGTGGCGGATGCGCGATAGAGCCGCCCACTGCTTCGCA
AGGAGCATCTCTGGACCCCCATTGGGTCAGTCAGTGTCTGTGCCACACAGTAGCAATGAT
G

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAACCCCTCAATTTGTATTTTTCCCTCGATGGCTAATTGGACACTTGACAAATGTTAAG
GCAGAGATGGCTTCAGAGTGAGACAGGCCCTGGATGCTCACTGTGGGCCTTTAACTCCCC
CAAGTGGAGCCCAGAGATGGCTGGGTAACAGCATTTAATTGTCATATTGATTCCGAGCTA
ATGGGGAATCCCCGTGTGATTATGAAGATATTAATACTGCTGCTGTCCCTGCTCAGCCCT
GATGCTGAGAGCCTTTGGTGGGACCCATCACGCCCCACGCTTTCCAGCAGCTCCAGCTTC
CAATCCTTTGTCATCCCCTAGAAACACATGAAAAGGAGACATTTTCTATGTAGGAGTAAA
CTGAGCTAGATCTGTCATCCTGTCTTGCTTTTGTCAGCTATTTTTAATCTCCTAAGACAC
TGATTACTCATTTTGCAAACTTATACTTGTTGATAAATACAGGGATTTGTTCACGGATCA
AATGCACCAAGCCAGGAGACAGACTCCACTCCTCTCGGGCCCAGAAGCGGTCCTCTAAGG
CCCGGGAGCAGCCTGGAGCAGCCTGTCCTGCGGGCTGGCGGGACCTGTGAAACATCAGCT
GGGGCACAGAACCAGCCAGACCACCCTGGGAACCCCAGGAGACGAGGAGCAGCCCAGGAC
AGGCTGCCCCGAGCCCCTTCCCAGCCCAGTGGGATCTGTCTGCCCTCCTTGTAGGAACGA
GGCACAGACTTGGAGGCTCCTGGGTGGCGGATGCGCGATAGAGCCGCCCACTGCTTCGCA
AGGAGCATCTCTGGACCCCCATTGGGTCAGTCAGTGTCTGTGCCACACAGTAGCAATGAT
G

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               484-617, - strand, RNAz p=0.932655

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               484-617, - strand, RNAz p=0.932655

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-812, gnl|bosTau2|chr11 (56055914-56056742)
               

               
               3-812, gnl|Hg17|chr2 (23832069-23832934)
               

               
               3-812, gnl|Mm7|chr12 (5030941-5030055)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-812, gnl|bosTau2|chr11 (56055914-56056742)
               

               
               3-812, gnl|Hg17|chr2 (23832069-23832934)
               

               
               3-812, gnl|Mm7|chr12 (5030941-5030055)

	3-812, gnl\|bosTau2\|chr11 (56055914-56056742)
	3-812, gnl\|Hg17\|chr2 (23832069-23832934)
	3-812, gnl\|Mm7\|chr12 (5030941-5030055)