Mixn-0030c10
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGATGCACTGTCGTAAAGCTGTGATTGTTTCCATGGGGAAAAGTCCCGGAATGGTTCTT GCCATGGTACTCGGCTCTCTCCGACACACCCAGGGAAACCATGAATGAGCTCTGTACTTT GACCTTGATGTCTGACAGAGGGTTAAAGAGTGACGACTCCGTCATGAGTTCCTTGTCCAG GGGATCCTGCAGACAGATGGGCCCACTGTACGTTCGGCTGACTGTTAGGTCTGGTTGCAT GGAGGGATTCAGAAGCAGGGAGTTACCTGTCAATGCAGAAGAGTCGATGACATCCACGCC ATAGTCACTCTGGCTCCGTCTGTAAAGGGTGACGCCGATGACCAGGACTGCAACGGCTAC GACTGCAGCTCCCAAGCCTGAGTACAAAGCAATGTCGCTGGCGTTCTCAATACTTTGGGG TTTTATTTCATGAAGAGGTTTTTTATCAGGACAGAGAGAAGTGCAGGTTATTTTCTGCAC TGACATTCCCTCACAAAAGGCCCCACCATTGAGAGGAGCTGGATTGGTGCAGGTCCGGGA ACGTTTCTGCCATCCTCTACCACAGCGAACATTGCAGGCTGACCACTCTGTCCAGGAAGA CCAGCCTCCATTCACATAAACCACCACTGTGGCCGACAGGCTCCTCCTCTTGGCCACGAT GTTGGCTGCCATGCAGGTGTAATTCCCTGAATCCGAGAGCCGTGCCTGCCTGATGATGAG GTTGTGGTCTGCCCTGGTATCATGTTCTCATCTTGGTCAGAGTNCATGGGCTCCTCGTTT TTCAGCCATTCCCACTCTGCAGCANGAACCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGATGCACTGTCGTAAAGCTGTGATTGTTTCCATGGGGAAAAGTCCCGGAATGGTTCTT GCCATGGTACTCGGCTCTCTCCGACACACCCAGGGAAACCATGAATGAGCTCTGTACTTT GACCTTGATGTCTGACAGAGGGTTAAAGAGTGACGACTCCGTCATGAGTTCCTTGTCCAG GGGATCCTGCAGACAGATGGGCCCACTGTACGTTCGGCTGACTGTTAGGTCTGGTTGCAT GGAGGGATTCAGAAGCAGGGAGTTACCTGTCAATGCAGAAGAGTCGATGACATCCACGCC ATAGTCACTCTGGCTCCGTCTGTAAAGGGTGACGCCGATGACCAGGACTGCAACGGCTAC GACTGCAGCTCCCAAGCCTGAGTACAAAGCAATGTCGCTGGCGTTCTCAATACTTTGGGG TTTTATTTCATGAAGAGGTTTTTTATCAGGACAGAGAGAAGTGCAGGTTATTTTCTGCAC TGACATTCCCTCACAAAAGGCCCCACCATTGAGAGGAGCTGGATTGGTGCAGGTCCGGGA ACGTTTCTGCCATCCTCTACCACAGCGAACATTGCAGGCTGACCACTCTGTCCAGGAAGA CCAGCCTCCATTCACATAAACCACCACTGTGGCCGACAGGCTCCTCCTCTTGGCCACGAT GTTGGCTGCCATGCAGGTGTAATTCCCTGAATCCGAGAGCCGTGCCTGCCTGATGATGAG GTTGTGGTCTGCCCTGGTATCATGTTCTCATCTTGGTCAGAGTNCATGGGCTCCTCGTTT TTCAGCCATTCCCACTCTGCAGCANGAACCCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
| 80-199, + strand, RNAz p=0.556531 | |
| 447-565, - strand, RNAz p=0.608372 | |
| 684-802, + strand, RNAz p=0.629809 |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 80-199, + strand, RNAz p=0.556531 | |
| 447-565, - strand, RNAz p=0.608372 | |
| 684-802, + strand, RNAz p=0.629809 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of AB055056, - |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 1-279, gnl|bosTau2|chr27 (20623544-20623265) | |
| 1-279, gnl|canFam2|chr16 (32224126-32223935) | |
| 1-279, gnl|danRer3|chr5 (21072348-21072199) | |
| 1-279, gnl|dasNov1|scaffold_2602 (8836-9025) | |
| 1-279, gnl|echTel1|scaffold_307108 (6917-6716) | |
| 1-279, gnl|fr1|chrUn (80296538-80296373) | |
| 1-279, gnl|galGal2|chrUn (8790959-8790768) | |
| 1-279, gnl|hg17|chr8 (35703178-35703369) | |
| 1-279, gnl|Hg17|chr8 (35703477-35703198) | |
| 1-279, gnl|loxAfr1|scaffold_12762 (47027-46828) | |
| 1-279, gnl|mm7|chr8 (27471423-27471230) | |
| 1-279, gnl|Mm7|chr8 (27471120-27471399) | |
| 1-279, gnl|monDom2|scaffold_1 (88114325-88114134) | |
| 1-279, gnl|oryCun1|scaffold_200489 (77719-77528) | |
| 1-279, gnl|panTro1|chr7 (36914659-36914850) | |
| 1-279, gnl|rheMac2|chr8 (36092036-36092227) | |
| 1-279, gnl|rn3|chr16 (67600269-67600460) | |
| 1-279, gnl|tetNig1|chrUn_random (2038201-2038010) | |
| 1-279, gnl|xenTro1|scaffold_5 (2791004-2790830) | |
| 447-615, gnl|bosTau2|chr27 (20575510-20575342) | |
| 447-615, gnl|canFam2|chr16 (32261671-32261536) | |
| 447-615, gnl|danRer3|chr5 (21091631-21091498) | |
| 447-615, gnl|dasNov1|scaffold_621 (4047-3912) | |
| 447-615, gnl|echTel1|scaffold_230869 (1824-1691) | |
| 447-615, gnl|fr1|chrUn (80301207-80301075) | |
| 447-615, gnl|galGal2|chrUn (8800275-8800140) | |
| 447-615, gnl|hg17|chr8 (35661630-35661765) | |
| 447-615, gnl|Hg17|chr8 (35661809-35661641) | |
| 447-615, gnl|loxAfr1|scaffold_728 (83100-83224) | |
| 447-615, gnl|mm7|chr8 (27512297-27512162) | |
| 447-615, gnl|Mm7|chr8 (27512116-27512284) | |
| 447-615, gnl|monDom2|scaffold_32 (25143145-25143280) | |
| 447-615, gnl|oryCun1|scaffold_200489 (123083-122948) | |
| 447-615, gnl|panTro1|chr7 (36873313-36873448) | |
| 447-615, gnl|rheMac2|chr8 (36050839-36050974) | |
| 447-615, gnl|rn3|chr16 (67558713-67558848) | |
| 447-615, gnl|tetNig1|chrUn_random (2043851-2043719) | |
| 447-615, gnl|xenTro1|scaffold_222 (750159-750024) | |
| 617-802, gnl|bosTau2|chr28 (21761093-21761277) | |
| 617-802, gnl|Hg17|chr10 (72716630-72716446) | |
| 617-802, gnl|Mm7|chr10 (60296981-60297165) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-279, gnl|bosTau2|chr27 (20623544-20623265) | |
| 1-279, gnl|canFam2|chr16 (32224126-32223935) | |
| 1-279, gnl|danRer3|chr5 (21072348-21072199) | |
| 1-279, gnl|dasNov1|scaffold_2602 (8836-9025) | |
| 1-279, gnl|echTel1|scaffold_307108 (6917-6716) | |
| 1-279, gnl|fr1|chrUn (80296538-80296373) | |
| 1-279, gnl|galGal2|chrUn (8790959-8790768) | |
| 1-279, gnl|hg17|chr8 (35703178-35703369) | |
| 1-279, gnl|Hg17|chr8 (35703477-35703198) | |
| 1-279, gnl|loxAfr1|scaffold_12762 (47027-46828) | |
| 1-279, gnl|mm7|chr8 (27471423-27471230) | |
| 1-279, gnl|Mm7|chr8 (27471120-27471399) | |
| 1-279, gnl|monDom2|scaffold_1 (88114325-88114134) | |
| 1-279, gnl|oryCun1|scaffold_200489 (77719-77528) | |
| 1-279, gnl|panTro1|chr7 (36914659-36914850) | |
| 1-279, gnl|rheMac2|chr8 (36092036-36092227) | |
| 1-279, gnl|rn3|chr16 (67600269-67600460) | |
| 1-279, gnl|tetNig1|chrUn_random (2038201-2038010) | |
| 1-279, gnl|xenTro1|scaffold_5 (2791004-2790830) | |
| 447-615, gnl|bosTau2|chr27 (20575510-20575342) | |
| 447-615, gnl|canFam2|chr16 (32261671-32261536) | |
| 447-615, gnl|danRer3|chr5 (21091631-21091498) | |
| 447-615, gnl|dasNov1|scaffold_621 (4047-3912) | |
| 447-615, gnl|echTel1|scaffold_230869 (1824-1691) | |
| 447-615, gnl|fr1|chrUn (80301207-80301075) | |
| 447-615, gnl|galGal2|chrUn (8800275-8800140) | |
| 447-615, gnl|hg17|chr8 (35661630-35661765) | |
| 447-615, gnl|Hg17|chr8 (35661809-35661641) | |
| 447-615, gnl|loxAfr1|scaffold_728 (83100-83224) | |
| 447-615, gnl|mm7|chr8 (27512297-27512162) | |
| 447-615, gnl|Mm7|chr8 (27512116-27512284) | |
| 447-615, gnl|monDom2|scaffold_32 (25143145-25143280) | |
| 447-615, gnl|oryCun1|scaffold_200489 (123083-122948) | |
| 447-615, gnl|panTro1|chr7 (36873313-36873448) | |
| 447-615, gnl|rheMac2|chr8 (36050839-36050974) | |
| 447-615, gnl|rn3|chr16 (67558713-67558848) | |
| 447-615, gnl|tetNig1|chrUn_random (2043851-2043719) | |
| 447-615, gnl|xenTro1|scaffold_222 (750159-750024) | |
| 617-802, gnl|bosTau2|chr28 (21761093-21761277) | |
| 617-802, gnl|Hg17|chr10 (72716630-72716446) | |
| 617-802, gnl|Mm7|chr10 (60296981-60297165) |